| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_2387 |
|---|
| Symbol | |
|---|
| ID | 8381542 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | + |
|---|
| Start bp | 2552285 |
|---|
| End bp | 2553103 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 645005149 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003162324 |
|---|
| Protein GI | 256833597 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.283392 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCATC GGACAATTGC CGCCATCTTG ATCGGTGTGA CCGCACTCGC AGGGTGCGCT
TCTCCCACGC CTGACGGTCC AGCACCACCC GGACAGGACA CCACCAACAC ATCACCGCGT
CCAATTCCAC CACCTTCTGC ACCAAGTAGC GTTCCGGAAC CCCACGAAAC CGACTACCCC
GAGCACTGGG ACACGCCGCC GGACTACCCC ATCACAGCGG ACAAAGACCT CACCGAAGAG
GATCTCCTCG CAGCACTGCG AATCTCAGCC ACCGCGCAAC CACACCCAGA TCACTGCACC
GCCAATGACG TTCGCGTCAC CATACAAGCG CTCGATGCCG CCCTCGGATA CCGGCTTGGC
TCCATCACCG TCACCAACAC CTCAACGACA CCCTGCACAG TTCAGGGATA TCCAGGGTTT
GGTGCACGAG GAGAATGGGG CAACACGTTC CTCCTCGTCG CAGAACAAGA CGACCCGCTA
CACAACCCAG ACCCTTCATC AAAACAATCT GACACAACTC AACAACCAGT GATCATTGTG
GATCCAGGTG GCTCCGCAAA AGCAAACATG GGGTGGTATG GAGAACTCGC AGGCGCCTAC
AGCGAACCAA TCTCGTTGTT CATCGTCCAA TTAGTCGAGG GTGACACCCC CGTCACCCAA
CCAGTGACAT CTCCGTATTC GGACAAGGAA CAAGACGCCA CCTCCGCGAA CGGGCTACCA
GCCCCCAACA GCTCGCTAGA CATCGGGCTC ACAACAAGCG TCGAGGTTGG ACCTTTCGCC
GTCATCCCGC CACCCAAAGA AGGGAACATC TCAGAGTAA
|
|---|
| Protein sequence | MSHRTIAAIL IGVTALAGCA SPTPDGPAPP GQDTTNTSPR PIPPPSAPSS VPEPHETDYP
EHWDTPPDYP ITADKDLTEE DLLAALRISA TAQPHPDHCT ANDVRVTIQA LDAALGYRLG
SITVTNTSTT PCTVQGYPGF GARGEWGNTF LLVAEQDDPL HNPDPSSKQS DTTQQPVIIV
DPGGSAKANM GWYGELAGAY SEPISLFIVQ LVEGDTPVTQ PVTSPYSDKE QDATSANGLP
APNSSLDIGL TTSVEVGPFA VIPPPKEGNI SE
|
|---|
| |