Gene Jden_2356 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_2356 
Symbol 
ID8381511 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp2516789 
End bp2517619 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content57% 
IMG OID645005118 
Productsulfate ABC transporter, inner membrane subunit 
Protein accessionYP_003162293 
Protein GI256833566 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4208] ABC-type sulfate transport system, permease component 
TIGRFAM ID[TIGR00969] sulfate ABC transporter, permease protein
[TIGR02140] sulfate ABC transporter, permease protein CysW 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0261114 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGTAACT CTCGGCGAAC CGTTGTGGCC CTTCGGGTTG TGGTCATTGT GTACCTGGTG 
TTGCTTGTGG GGTGGCCGGT TGCCCTCGTG GTGCGTAACA CGTTCGCCAG CGGGTTTGAC
GCGCTCGGTG GGGCGCTGGG CGACCCAATG GTCATGTTTT CCCTGAAGCT CACTCTTGCT
GTGGCGCTTC AAGCCGTCGT ACTGAACACC GTTTTTGGGG TGGGCATGTC GCTGCTGCTG
GTGCGGTATT CGTTTCCGGG GCGCAGGGTG CTTTCTGCGT TGGTGGATGT TCCGTTGTCG
GTGTCGCCAG TTGTTGTGGG GTTAGCGCTC ATTCTTGTGT ATGGGCCAAC AGATTCGTGG
TTTGGGCAGT GGCTTGGCGA CCGGGGCATC GACATTATTT TCTCTACCCC GGGCATGGTG
ATGGCAACAG CGTTTATTTC GTTACCGCTG GTTATCCGTG AAGTGGTGCC GGTACTCACA
GAACGCGGAA CAGATGAGGA ACTTGCTGCC GCATCGCTTG GTGCCGGCCC AGTTCAGACC
TTTACCCGCA TCACGTTGCC TGCCATCAAG TGGGCTGTGG TGTACGGGGT GGTTCTTACT
CTTGCTCGGT CCTTAGGTGA GTTTGGGGCT GTGAAAATTG TGTCGGGCAA TATCGAAGGT
GCCACCCAAA CAGCAACGTT GTTGGTGGAG GACCGCTACC AGGATTTTGA TCAACCAACC
GCCTATGCCA CCGCGTTCTT GTTGGCTGCT GTGTCGGTTT CGTGCATTGT TGTGGTGACG
TTTTTGCGCC GTGATCATGC GACCTCCCTC CAGAAAGGCC CTCGCCGGTG A
 
Protein sequence
MGNSRRTVVA LRVVVIVYLV LLVGWPVALV VRNTFASGFD ALGGALGDPM VMFSLKLTLA 
VALQAVVLNT VFGVGMSLLL VRYSFPGRRV LSALVDVPLS VSPVVVGLAL ILVYGPTDSW
FGQWLGDRGI DIIFSTPGMV MATAFISLPL VIREVVPVLT ERGTDEELAA ASLGAGPVQT
FTRITLPAIK WAVVYGVVLT LARSLGEFGA VKIVSGNIEG ATQTATLLVE DRYQDFDQPT
AYATAFLLAA VSVSCIVVVT FLRRDHATSL QKGPRR