Gene Jden_2354 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_2354 
Symbol 
ID8381509 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp2514980 
End bp2516014 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content64% 
IMG OID645005116 
Productsulfate ABC transporter, periplasmic sulfate- binding protein 
Protein accessionYP_003162291 
Protein GI256833564 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1613] ABC-type sulfate transport system, periplasmic component 
TIGRFAM ID[TIGR00971] sulfate/thiosulfate-binding protein 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0635849 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTCAC GACGTTCTGC CTGCGTGGTC GCTGTTATTG CATGCCTGGT GTTGTCTGGG 
TGTGGTCCGG CTCCTGTTGT GGCGGCGGCG GATGGTTCGG TGATGACGTC TCAGGTGACA
CTGGCGGGTT TTGCTGTGTC AAAGTCGGCA CACGAGTCGG CTCGGGTGGC GTTTGCTGAC
ACGGAGCAGG GCTCGGGGGT GGCGTGGGCG TCATCGTATG GGCCGTCCGG TGATCAGTCT
CGCGCGGTGG CGTCTGGGTT GCCTGCAGAT GTGGTGCATG TGTCGATCCC GGATGACATC
GAGCGGTTGG TGGCGGCCGG CCGGGTCTCT CCTCAGTGGT CTGACGGTGA GGACGCTGGG
GTGTTGGCGT CCTCTGTTGT GGTGTTTGTG GTGCGTCGGG GGAACCCGAA GAACATCACT
GATTGGGAGG ACCTGACCCG TGCGGACGTA TCCGTGGTGA CGCCTAACCC GGGTGCGTCG
GGGGCTGCAC GCTGGAATAT TGTCGCTGCG TGGGCATCCC AGATTGCGGC TGGCGGGTCG
CCTGAGGAAG CGGACGCGTT TGTGGGCGAG GTCATGTCCC GGGTTGCCAC CCTGCCCAGT
TCCAGCCGTG ATGCCACGAC AGCATTTTCG GCAGGGACAG GTGACGTGTT GTTGTCCTAT
GAGAATGAGG CGATCGCGGC CCGCCAGCAT GGGGTGGACG TGGACTATGT AATCCCTCCT
TCCACGGTCC GCATTGATAC CCCGGGGGCG GTGACGATCG GTGCACCTCA AGCGGCGTCA
GATTATCTTG CGTTTGCGCG TTCTGATGCT GGTCAGCGCG CTTTTGCGGT GGAGGGGTTT
CGTCCGTTCG GTGACGCGGA TTGGGTGTCG TCGTTGGTGG TTCCCGGGGC CATGGACCCG
CACGACCCGT TTCCTACCCC TGCCACGCTC CTGACTGTGG ATGACGTGGG CGGCTGGGAC
GTGGTGACGC AGCGTTTGTT CGCTGCTGAC GGGGTTGTTG CCCGGTTGCA ACGCGAGGCG
GGTGGCGCAT CGTGA
 
Protein sequence
MRSRRSACVV AVIACLVLSG CGPAPVVAAA DGSVMTSQVT LAGFAVSKSA HESARVAFAD 
TEQGSGVAWA SSYGPSGDQS RAVASGLPAD VVHVSIPDDI ERLVAAGRVS PQWSDGEDAG
VLASSVVVFV VRRGNPKNIT DWEDLTRADV SVVTPNPGAS GAARWNIVAA WASQIAAGGS
PEEADAFVGE VMSRVATLPS SSRDATTAFS AGTGDVLLSY ENEAIAARQH GVDVDYVIPP
STVRIDTPGA VTIGAPQAAS DYLAFARSDA GQRAFAVEGF RPFGDADWVS SLVVPGAMDP
HDPFPTPATL LTVDDVGGWD VVTQRLFAAD GVVARLQREA GGAS