Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_2321 |
Symbol | |
ID | 8381477 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | + |
Start bp | 2486048 |
End bp | 2488153 |
Gene Length | 2106 bp |
Protein Length | 701 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 645005084 |
Product | Fibronectin type III domain protein |
Protein accession | YP_003162259 |
Protein GI | 256833532 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCGTTG AGTGGGGTTC TTGGTCCGGT CCTTCGGGGA CGCGTTTTCG TGTAGGTATT GATTTGTCGG TGTCGGGTAC GACAATTACC GCGCGGTATT ACTTGGGGTC TGAGGGTGGG GTTTCTGACA ATCAGAAATT GGTGATGGGT TATTCTATTA CTGGTTCTGT GAATTACACT GCTTCTCAGC CGTATAATGG CGGCACACAG CTGATCGCTA CGCGGTCTGT GACGTCGTCG CGTGGGGTGC AGCGTCGTTT TTCTGCGCGT ATTGAGGGCA TTTACAATGG TGCTTCTCCG CGTGTGGATG CTTATGCGAT GGTCCCTGCC GCACCGCCGT CGTCGCCGGG GACGCCGTCT GTGGTTAGTG TGTCTTCTAC CTCCATGAGG ATAAGCTGGT CTGCTCCGTC GTCTACTAAT GGTGCGTCGA TTACGCGCTA TCAGGTGCAG CGGGCGGATA ACAGCAGCTT CACGTCTGGT ACCGCCGCAG CAACAACCAC TAGCCGGTCG TACACGAACA GTAGTCTTTC ACCTAATCGG ACGTATTACT GGCGTGTGCG GGCGGAAAAC TCCGCTGGCT GGTCTGGCTG GTCTGGTGGG CGTGCTGCGA CGACTTCCCC TGCTCTACCG ACCGCCCCGA CTTCTGTGGC TGTGACACGG AATAGTGACA CGTCGCAGGC GTTGTCGTGG ACTCGGCAGG CGACTTCGCA GGCACCTTAT GACTCGATTC AGGTTGAGCG GAAAGACACC GTCAACAGCT CGTGGACTCG TGTTGCGACG GTTGGTGGCA CTGCAACGTC GTACACGGAT ACATCCACTG TTGCTTCGCG TCGGTATGAC TACCGGGTGC GGGCGGTGAA CGGCGGTGGC GCTGGCGGGT ACTCGGCTAC GGTGAGTGTG TCTACGTCGC CGAGTGCACC ATCTGGTGTG GTAGCGAAGA AATCGGGCAC GCAGATCAGT GTGTCTTGGT CTAAGTCAAC GAACCAGTGG GGGATTTACC AGCACGTCAT CCAGGATAAT CCCGGTGGGA CTGGCTGGGT GGATGTTGCA ACCGTGGGGG ATGTCACCTC ATGGGCTGAC ACGGCCCCGG ACACGAATGT CACTCACCAG TATCGTGTGG CTACGCGGGT GTACACGTAT GGTGTGGGGT CTGCTGGGTT GACTGGCGGA TGGTCCACCC CATCGGCTGT GGTGCAGCTG ATCGCGCCAC CGTTGGCACC CTCGCGTCGC CTACCAGTCG GGACGATCGA CCGCGCCGCG ATCCTGACCT TTGCATGGAC CCACAACCCA GTGGACACCA CTGATCAGAC CGCTTACGAA CTGCAATACC GGGTCAATGG TGGGGCGTGG GTGCTGCTTA CTGGCACGAC GGCTGATGTG CGGATGGTGT CCGCCCTTGG GGTGTCCGGC ACTCTTGAGT GGCAGGTCCG CACAAAGGGT GAGCACCCCG ACTTTGGGCC ATGGTCACCG GTCTGGTCAG CGTCTTTGGC GTCTTTACCT GCCGTGGTTT TGCTTGCACC GGTCGGGACT CTACCGTCGT CTAGGTTGAC GGCGGAATGG TCTTACGCGA ACGCTGACAG TACTGGGCAG GCGGTGTGGG AAGCGCAGTT GCTGGATTCT GAGGGTGCTC TTTTGGAGAC TCGTACGGGG TCTGGTGGGG CGGTTTCAGC TGTTTTTGAG ACAGCCCTTG TGGATGGTGC AGATTATGTG GCTCGTGTGC GTGCTCGGTC TGGTGCGGGC ATGTGGTCGA ACTGGGAGTC GCAGCAATTC ACGACTGATT TCCCGCTACC GGTCACGGTT GAGGCTATCC CTGTTTTCGA TAGGGAAACA GGGGTCACCA CACTGACTTT CACTGACCCG CCAACGCCCT CAACTTACGA GTGGACTGGC CAGCCTAATG CGTCTCCCAG TACAAGTAAC ACGGCTGATG GCACTATCAC TAACCTCGAG ATAAACCCTC GGTTCGTAAC GGACGCAGAC ACCCCTCCTG ATTCCACACG CGAGCCACAC GCGCTGTTAC CAGCTGGTAG TTATGCCCTC GTTATCCCTG CCGCGCCGAC CGGTTTTGGT TACGGCAGTT TCGCTTACGA CCCTTTTGGA GAATGA
|
Protein sequence | MAVEWGSWSG PSGTRFRVGI DLSVSGTTIT ARYYLGSEGG VSDNQKLVMG YSITGSVNYT ASQPYNGGTQ LIATRSVTSS RGVQRRFSAR IEGIYNGASP RVDAYAMVPA APPSSPGTPS VVSVSSTSMR ISWSAPSSTN GASITRYQVQ RADNSSFTSG TAAATTTSRS YTNSSLSPNR TYYWRVRAEN SAGWSGWSGG RAATTSPALP TAPTSVAVTR NSDTSQALSW TRQATSQAPY DSIQVERKDT VNSSWTRVAT VGGTATSYTD TSTVASRRYD YRVRAVNGGG AGGYSATVSV STSPSAPSGV VAKKSGTQIS VSWSKSTNQW GIYQHVIQDN PGGTGWVDVA TVGDVTSWAD TAPDTNVTHQ YRVATRVYTY GVGSAGLTGG WSTPSAVVQL IAPPLAPSRR LPVGTIDRAA ILTFAWTHNP VDTTDQTAYE LQYRVNGGAW VLLTGTTADV RMVSALGVSG TLEWQVRTKG EHPDFGPWSP VWSASLASLP AVVLLAPVGT LPSSRLTAEW SYANADSTGQ AVWEAQLLDS EGALLETRTG SGGAVSAVFE TALVDGADYV ARVRARSGAG MWSNWESQQF TTDFPLPVTV EAIPVFDRET GVTTLTFTDP PTPSTYEWTG QPNASPSTSN TADGTITNLE INPRFVTDAD TPPDSTREPH ALLPAGSYAL VIPAAPTGFG YGSFAYDPFG E
|
| |