| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_2275 |
|---|
| Symbol | |
|---|
| ID | 8381431 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | + |
|---|
| Start bp | 2461885 |
|---|
| End bp | 2462655 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 645005038 |
|---|
| Product | phage antirepressor protein |
|---|
| Protein accession | YP_003162213 |
|---|
| Protein GI | 256833486 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3645] Uncharacterized phage-encoded protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.22995 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCTGT CCATTGTACC AACGATTGAG CGCTCAGACG ATGGTGCTCT TGTCGTTTCA
TCCGAGCAAA TCGCCGAGGG GTCAGGCGTC CAACACAAGA ACGTGCTGGA GCTCGCAGCG
ACCCACATGG CGAGTCTTCA ACGATTTGGG ACGGTCGCGT TTGAAACGCG ACCGTTGCCA
GGCGGCGGAA ACCCAGTCCG AATCGCTCTG CTGAATGAGC AGCAAGCAAC CCTACTCATG
ACCTTTATGC GGAACACCGA GCAAGTCGTC GCTTTCAAAG TCGCTTTGGT GGATGCCTTC
TACCAGATGG CTAAAACCCT GAGGCCGACT GTCCCGCAAA CCTACGCCGA AGCCCTACGC
GCCGCAGCCG ACGCAGCCGA CGCAGCCGAC GCACTATCCC AGAAAGAGCA AGTCATCGCA
CTACTGGAGC CGAAAGCAGC GTCGTGGGAT TCGGTCGTGT CATCTGCCGG GTCGTGGTCC
TTCAATGATG CCGCGAAAGT GCTGCATGAG TCGGGGCAGA TCGACATTGG CGAGAAGCGC
CTAGTCCGCG CACTCGTGGA CTGGGGGTAC CTGTACCGAG ACCACAAAAA GCGCCCTCAC
GTGTACCAGC GCTTTGTAGA GCAGGGACTT TTCGTCGCTA AAGCCCGCAC CTACAAAGAT
CTAAAAACCG GCATCGAAAT GGCGTCATCA GCCCCACAAG TACGCATCAC CGGTAAAGGC
CTAGACATGA TCCGCACCCG CATCACCGCA AACAAGGAGG TCACAGCATG A
|
|---|
| Protein sequence | MNLSIVPTIE RSDDGALVVS SEQIAEGSGV QHKNVLELAA THMASLQRFG TVAFETRPLP
GGGNPVRIAL LNEQQATLLM TFMRNTEQVV AFKVALVDAF YQMAKTLRPT VPQTYAEALR
AAADAADAAD ALSQKEQVIA LLEPKAASWD SVVSSAGSWS FNDAAKVLHE SGQIDIGEKR
LVRALVDWGY LYRDHKKRPH VYQRFVEQGL FVAKARTYKD LKTGIEMASS APQVRITGKG
LDMIRTRITA NKEVTA
|
|---|
| |