| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_2265 |
|---|
| Symbol | pntA |
|---|
| ID | 8381421 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | + |
|---|
| Start bp | 2453864 |
|---|
| End bp | 2455417 |
|---|
| Gene Length | 1554 bp |
|---|
| Protein Length | 517 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 645005024 |
|---|
| Product | NAD(P) transhydrogenase subunit alpha |
|---|
| Protein accession | YP_003162203 |
|---|
| Protein GI | 256833476 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3288] NAD/NADP transhydrogenase alpha subunit |
|---|
| TIGRFAM ID | [TIGR00561] NAD(P) transhydrogenase, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.24376 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.39241 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGTATAG GTGTACCCCG CGAGGTGTCG CCCGACCAGA GACTCGTCGC CGCGACCCCA
CTCACCGTCC AACAACTCAT CAAACTCGGC TACGACGTCG CCATCGAAAC CGGTGCCGGC
CTCGGAGCAA ATATCCCCGA CACCGCCTAC AGCGACGTCG GAGCAGCCAT CACCGGAAAA
GACGAAGCCT GGGCGTCAGA CATCGTCATC ACCGTGGACC AACCCGACGC CACCCACCGC
GCCCTCCTCG CAGACGGCGC AACCCTCATC ACCCGCATGC AACCCGATGA CGAACCCGAC
GTCGTCACCG AACTGCAAGC ACGCGGCGTG ACCGCACTGA ACCTTCTCTC GGTCCCACGC
ATCTCCCGCG CCCAAGCACT CGACGTACTT TCCACCATGT CGAACGTGTC CGGATACCGC
GGAATCATTG AGGCCGCCGA AGAATACCCC GGGATGTTCG CCGGACAAGT CACCGCAGCC
GGGTCCACCA AACCCGCCCG CGTCTTTGTC ATCGGCGCCG GCGTTGCCGG ACTCGCCGCA
CTCGGCGCAG CCGGAAGCCT CGGAGCTGAC GTCCACGCCT ACGACGTCCG CGCTGACGCA
GCCGAACAAA TCGAATCCAT GGGCGCAACC TTCGTGCGCA TCGACACCGA AGCACAAGAA
TCAGCCGACG GTTACGCCAA AGAACTCACC GACGACCAAG CCGCCGCCAC CGCACGCGTC
TACGCCGAGC AAAGCGCACT CGCTGACATC GTCGTCACCA CCGCACTCAT CCGCGGCAAA
GCCCCCATCA CCATCACCAA AGAGATGGTC GAAGCGATGC GCCCCGGATC TGTGATCGTC
GACCTCGCAG CCCAAGGCGG CGGGAACTGC GAACTGACTG TCCCCGGTGA AAAAATCGTC
ACAGCCAACG GGGTGACAAT CCTTGGGTAC ACCGACCTTC CCGGTCGCAT GCCCAAGCAC
ACCTCACAGC TGTACGGGAC GAACATCGTC AACCTCATGA AGCTCCTCAC CCCAGGGAAA
GACGGAGCAC TCGTCCTCGA CCTTGACGAC GTCATCCTGC GGGGCATCAC CGTCACCCAT
GACGGTGAGA TTTACTGGCC ACCCCCACCC ATCCAGGTCT CAGCGGCGCC AGCACCTGCA
CCTGCATCGG TTGACGCCAC ACCTGACACT GCCGTCACCG AGCAGCCAGC GGCACCAGGT
CTATCCAAGA AAACAAAGAA CCTCTTGGGT GCACTTGCTG GAGCGCTCAT CCTCATCGGG
ATCATCACCG TGTCACCGGC CGCATTCACC GGGCACATGA CGGTGTTTGT CCTCGCCGTG
GTTGTCGGGT TCTATGTGAT CCTTGGGGTC ACCCACTCAC TCCACACCCC ACTGATGGCG
CAAACCAACG CGATCTCCGG GATCATCCTC GTGGGATCCC TGCTGCAAAT TGGCAGTGAC
AACATTGTCA TCACGATCAT CGCGATGATC GCTGCGGCCG TGGCCTCCAT CAACATCTTT
GGTGGATTCC ACGTAGCGTC CCGCATGCTC GCCATGTTCC AAAAGGAGTC CTGA
|
|---|
| Protein sequence | MRIGVPREVS PDQRLVAATP LTVQQLIKLG YDVAIETGAG LGANIPDTAY SDVGAAITGK
DEAWASDIVI TVDQPDATHR ALLADGATLI TRMQPDDEPD VVTELQARGV TALNLLSVPR
ISRAQALDVL STMSNVSGYR GIIEAAEEYP GMFAGQVTAA GSTKPARVFV IGAGVAGLAA
LGAAGSLGAD VHAYDVRADA AEQIESMGAT FVRIDTEAQE SADGYAKELT DDQAAATARV
YAEQSALADI VVTTALIRGK APITITKEMV EAMRPGSVIV DLAAQGGGNC ELTVPGEKIV
TANGVTILGY TDLPGRMPKH TSQLYGTNIV NLMKLLTPGK DGALVLDLDD VILRGITVTH
DGEIYWPPPP IQVSAAPAPA PASVDATPDT AVTEQPAAPG LSKKTKNLLG ALAGALILIG
IITVSPAAFT GHMTVFVLAV VVGFYVILGV THSLHTPLMA QTNAISGIIL VGSLLQIGSD
NIVITIIAMI AAAVASINIF GGFHVASRML AMFQKES
|
|---|
| |