Gene Jden_2258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_2258 
Symbol 
ID8381414 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp2448302 
End bp2449114 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content60% 
IMG OID645005017 
ProductABC transporter related 
Protein accessionYP_003162196 
Protein GI256833469 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1125] ABC-type proline/glycine betaine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.36759 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCACTT TCACTGATGT GACAAAACGC TACCCGGGCG GTACCTTCGC CGCGCACAAC 
GTCACCTTCA CTGTCCCCGC TGGCAGCACC ACAGCGCTTG TTGGGCCCTC TGGTGCCGGA
AAAACAACTC TGCTCCGCAT GGTCAACCGT ATGGTGGACC CTGACTCCGG CACCATCACC
GTCAACGGAC GGAACATTCA CGACTCGGAC CCAGTCCGAT TGCGGCGGTC CATCGGGTAC
GTGTTGCAAG AAGGGGGCCT ACTGCCGCAC CGTAACGTCC TGGACAACGT GGCGCTTGTG
GCGAAGTTGG GTGGCGCATC GACAAAAGAA TCCAAGGAAC GGGCGCTGCA CCACCTGGGA
TTAGTGGGAA TTGAAGGTGC GATGGTTCGC CGGTACCCCC ACCAGCTCTC GGGTGGTCAG
CAGCAGCGTG TGGGGGTGGC CCGGGCGCTG GTCGGAGGCG CTGATGTGTT GTTGATGGAT
GAACCATTTG GTGCGGTTGA CCCCATGATT CGCCGTGATT TGCAATCCGA AACCCGCCGC
TTACAGCGGG ATTTGGGGAA AACTGTTTTG CTGGTCACGC ACGACATTGA CGAGGCATTT
GTGCTCGCTG ACCAGATCAT TGTGTTGCGG CAAGGTGGGG TGGTCGCACA GCAGGGCTCG
CCAGCTGAGT TGCTGGGGCA ACCAGCTGAC GATTTTGTTG CGGACCTTGT TGGTCTGACC
TCAGGCCAGC GGGACCTTCA CGTGGTGGAG GAACACGGGG TGCGGCTTGT GCGGGATTCG
CATGGCCGGT TCTTGGGTCG GGTTCACGCG TGA
 
Protein sequence
MITFTDVTKR YPGGTFAAHN VTFTVPAGST TALVGPSGAG KTTLLRMVNR MVDPDSGTIT 
VNGRNIHDSD PVRLRRSIGY VLQEGGLLPH RNVLDNVALV AKLGGASTKE SKERALHHLG
LVGIEGAMVR RYPHQLSGGQ QQRVGVARAL VGGADVLLMD EPFGAVDPMI RRDLQSETRR
LQRDLGKTVL LVTHDIDEAF VLADQIIVLR QGGVVAQQGS PAELLGQPAD DFVADLVGLT
SGQRDLHVVE EHGVRLVRDS HGRFLGRVHA