Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_2258 |
Symbol | |
ID | 8381414 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | + |
Start bp | 2448302 |
End bp | 2449114 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 645005017 |
Product | ABC transporter related |
Protein accession | YP_003162196 |
Protein GI | 256833469 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1125] ABC-type proline/glycine betaine transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.36759 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCACTT TCACTGATGT GACAAAACGC TACCCGGGCG GTACCTTCGC CGCGCACAAC GTCACCTTCA CTGTCCCCGC TGGCAGCACC ACAGCGCTTG TTGGGCCCTC TGGTGCCGGA AAAACAACTC TGCTCCGCAT GGTCAACCGT ATGGTGGACC CTGACTCCGG CACCATCACC GTCAACGGAC GGAACATTCA CGACTCGGAC CCAGTCCGAT TGCGGCGGTC CATCGGGTAC GTGTTGCAAG AAGGGGGCCT ACTGCCGCAC CGTAACGTCC TGGACAACGT GGCGCTTGTG GCGAAGTTGG GTGGCGCATC GACAAAAGAA TCCAAGGAAC GGGCGCTGCA CCACCTGGGA TTAGTGGGAA TTGAAGGTGC GATGGTTCGC CGGTACCCCC ACCAGCTCTC GGGTGGTCAG CAGCAGCGTG TGGGGGTGGC CCGGGCGCTG GTCGGAGGCG CTGATGTGTT GTTGATGGAT GAACCATTTG GTGCGGTTGA CCCCATGATT CGCCGTGATT TGCAATCCGA AACCCGCCGC TTACAGCGGG ATTTGGGGAA AACTGTTTTG CTGGTCACGC ACGACATTGA CGAGGCATTT GTGCTCGCTG ACCAGATCAT TGTGTTGCGG CAAGGTGGGG TGGTCGCACA GCAGGGCTCG CCAGCTGAGT TGCTGGGGCA ACCAGCTGAC GATTTTGTTG CGGACCTTGT TGGTCTGACC TCAGGCCAGC GGGACCTTCA CGTGGTGGAG GAACACGGGG TGCGGCTTGT GCGGGATTCG CATGGCCGGT TCTTGGGTCG GGTTCACGCG TGA
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Protein sequence | MITFTDVTKR YPGGTFAAHN VTFTVPAGST TALVGPSGAG KTTLLRMVNR MVDPDSGTIT VNGRNIHDSD PVRLRRSIGY VLQEGGLLPH RNVLDNVALV AKLGGASTKE SKERALHHLG LVGIEGAMVR RYPHQLSGGQ QQRVGVARAL VGGADVLLMD EPFGAVDPMI RRDLQSETRR LQRDLGKTVL LVTHDIDEAF VLADQIIVLR QGGVVAQQGS PAELLGQPAD DFVADLVGLT SGQRDLHVVE EHGVRLVRDS HGRFLGRVHA
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