Gene Jden_2245 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_2245 
Symbol 
ID8381402 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp2433984 
End bp2434826 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content62% 
IMG OID645005004 
ProductGlycerophosphodiester phosphodiesterase 
Protein accessionYP_003162184 
Protein GI256833457 
COG category[C] Energy production and conversion 
COG ID[COG0584] Glycerophosphoryl diester phosphodiesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACAACAC CACAACCCCG TGACAGTGCC CCCACCCACC CGGTGGGGGC CACCACCGCC 
CCGCAGATCA TCGCGCACCG GGGCAACAAA TCCGTTGCCC CCGAAAACAC ACTCGCCGCG
TTCGTGTCCG CAATCAAAGC AGGCGCACAC AGCATCGAAA TGGACATCGT TCCCTCCAAA
GACGGTGTCC CCATGGTCAT CCACGACACA ACTCTCGATG CGACCACCAC CGGCACCGGC
CACGTCACCG ACTACACCGC CACCGACATC GCCCAACTCG ATGCAGGCAG CTGGTTTGAC
CCCGCCTACA CCGGGCAACG CGTTCCCACC TTCGACCAAT TCGCAGCACT CATTGCCCGC
CACCCAGGGG TCGAAGTTCT CCTCGAATTC AAAGGAGATT GGGACACCAC CGCCTGCGCG
CCAGTCCTCG AAACCATCGA CACACACGGG ATCAGCGACC GCACCATCGT GCAGTCCTTC
AACCGCACCA CCATCGAATC GCTGCATACC CTCGCCCCCA CCAGGCGGCG CGGAGTCCTC
ACCGTCACCG ACATCGACGG ACTCATCGCC CAATGCCAAG CCGCCAACAT CTGGACCATC
AACCCACACG TTGACCACGT CCTTGCCAAC CCCAGCCTCA TCGAACGCAT CCACAACGCA
GGAATGCGCA CAATGATCTG GACTGCAAAC ACCCCCAACC AGTGGGCCAC ACTCGTGGAA
CTCGGCGTCG ACGCGATCAT CACCGACCGC CCCGACGCAC TCGCCGGATG GTACGAAGCC
CACGGGCTCA CCCACCAGAC CAGCACCAAC ACCACACCCG ATGCGGAACA ACACACAACA
TAG
 
Protein sequence
MTTPQPRDSA PTHPVGATTA PQIIAHRGNK SVAPENTLAA FVSAIKAGAH SIEMDIVPSK 
DGVPMVIHDT TLDATTTGTG HVTDYTATDI AQLDAGSWFD PAYTGQRVPT FDQFAALIAR
HPGVEVLLEF KGDWDTTACA PVLETIDTHG ISDRTIVQSF NRTTIESLHT LAPTRRRGVL
TVTDIDGLIA QCQAANIWTI NPHVDHVLAN PSLIERIHNA GMRTMIWTAN TPNQWATLVE
LGVDAIITDR PDALAGWYEA HGLTHQTSTN TTPDAEQHTT