Gene Jden_2236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_2236 
Symbol 
ID8381394 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp2425315 
End bp2426385 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content60% 
IMG OID645004996 
ProductNUDIX hydrolase 
Protein accessionYP_003162176 
Protein GI256833449 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.592107 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.569129 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCATCAC ATCATTCACC CGCAGCACCT GCCGGGAAAG TCAGCGGTGG GCGCATCCAT 
GGCGCTCTTG GCGTGGCTGC TGAACCGAAA ACGACCGCAC CAGTCATTGA GTGTGCTGGA
GCCTTGGTGT GGCGCATCAA AGACGAAGAT CTTCAGGTTC TACTGATTCA CCGTCCCCGA
TACAACGACT GGTCATGGCC CAAAGGCAAA CGCGACCCCG GCGAAGCTCT ACCGTGCACC
GCGGTACGGG AGGTAAAAGA AGAAACCGGA AAAGACATCA TCTTGGGGAT TCCGCTGCCT
GGTTTGCAGT ACATCACCCC TGAAGGTGAC CTCAAACGGG TCCATTACTG GGCGGCCCAC
ACCACAAAAA AATCACACGG TGCGCTGGCT GCCCGTGCCC CCATCGGCGA GGTCAACCCT
GATGAAGTGG ATGACACGCA GTGGATGTCA GTCAAGGACG CCGCGAAAGC ATTGACCCGC
GCCGCGGACC GGGCCCCCTT AGACGCCCTG ATTCATGCCC ACACCGAAGG GCGCCTCGAT
TCTCACGTGG TCGCCATTGC ACGGCACGGC AAAGCCGTGT CCCGCGCATC GTGGGGTGGG
AAAGAAGGAG ACCGACCGTT AACACCACTG GGGCAAGGAC AGTCATGGGC TCTTGTTCCC
GTGTTGTCGG CTTTTGGTGT GATCAGTGTG GTGACCAGCA GGTGGGCTCG ATGCGCCCAA
ACAATGCGCC CCTACGAGCA GGCAGCCCGC GTGCACGCGA AGGAGCTTGA CACTCTCACT
GAAGCGAGCC ACGAGCGTGA CCCTGACCTG GTGGTGCGGG CCATGACGGA AATCATCACG
GACAACCGGC CCACGGTGCT GTGCTCTCAC CGACCGGTGC TCCCCACGGT GTTTGCTGCC
ATGAAGAAAG CTTCTGCCAC AAAGGGCATT GGCAACGCAT TCCCGGAGTC TGACCCCTAC
CTCACCACTG GTGAGGTCCT CATCGCCCAT GTGGTCCCCC GTGTGGATGG GAAAGGAAAA
ATGGGGGGCA CCATCGTGGG AGTGGAGCGG GTAAGACCAG AGGTGATGTA G
 
Protein sequence
MASHHSPAAP AGKVSGGRIH GALGVAAEPK TTAPVIECAG ALVWRIKDED LQVLLIHRPR 
YNDWSWPKGK RDPGEALPCT AVREVKEETG KDIILGIPLP GLQYITPEGD LKRVHYWAAH
TTKKSHGALA ARAPIGEVNP DEVDDTQWMS VKDAAKALTR AADRAPLDAL IHAHTEGRLD
SHVVAIARHG KAVSRASWGG KEGDRPLTPL GQGQSWALVP VLSAFGVISV VTSRWARCAQ
TMRPYEQAAR VHAKELDTLT EASHERDPDL VVRAMTEIIT DNRPTVLCSH RPVLPTVFAA
MKKASATKGI GNAFPESDPY LTTGEVLIAH VVPRVDGKGK MGGTIVGVER VRPEVM