| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_2214 |
|---|
| Symbol | |
|---|
| ID | 8381372 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | + |
|---|
| Start bp | 2393350 |
|---|
| End bp | 2394648 |
|---|
| Gene Length | 1299 bp |
|---|
| Protein Length | 432 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 645004968 |
|---|
| Product | SCP-like extracellular |
|---|
| Protein accession | YP_003162154 |
|---|
| Protein GI | 256833427 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.169966 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACATGA GGCACGCACG CCCCACAGGT CCATCGTGGA TCGCAGTTGC ACTTCCCCTC
GCACTGAGCA CCCTGCTCAT CAGTGGCGCT GCAGTTGTCG CCACCGGGGT CCTTGACGCC
CCTTCAGGGC AGGCACAAGC ACCAGACCTT ATCGTGCCAC CAGGTCGCAT CCCCCAGCAC
TACACAGACC CGGAACTCAT CAGCGCCGGT GAAGACCTCG CCGCGGCAGA ACGTGATGCT
CGCGAAGATG CTGCACAACG CCTAGCGGAA GAAAAGGCTA AGGAAAAGAA AGCAGCGAAA
CAGACTGAGG CAAAGAAGAA GGCAGCTGCC GAAAAGAAAC GTGCCGCCGA AGAACAACAT
GCCGCAAACA ACAGTGCAGA GACCCCAACA ACAGGCAGTG TCGCAGCGGG GACACGTGAC
GCCCGCGCGA CAATTCTTCC CGAAACTGGG GTCCTTGACA CCGCAAGCCG CTCCGCTGTT
CGTGACGCTT TCCGTACCCG CGTGGCTCAA CACCTTGTCG ACGAACCCCA ACCGCAGGTT
AGTGGTTGCA CTGTCGCCCC CACCAGTAAC GCCACCCGTG AACGCGCGTT GTCTGCCGTC
AACTTTTCCC GCGCTCTCGT TGGGTTGTCG CCAGTGACGT TTAGCGCTGA CTACAACGAG
CGTTCCGAAC AGGCTGCTCT CGTGCAACAC ATTCAAGGTT TCCTCAGCCA CAGCCCCACT
GACGGTGACT GTGATTTGCC CGTGGGAGTG CGCACCTCTG GTGAAGCGAA CCTGTCCATG
GGGACACATG GCGCTCGAAA CATCCTTGCC TATCTAGAGG ACTCCGGCGA TAACAACGCC
CCCGTTGGCC ACCGAAAACA CATTCTCAAC CCTGGCCAAC AAGAAATGGG GATTGGCTTC
GCGGGGCAAT ATGGCGCCCT GTACGTGTTC GGGGAGACCT CCTCAAACAA TCCCACACCA
GAGTGGATTC CCTGGCCTTC CGCAGGCTAT TTCCCCACCG ATATGGAGCC TCAGGGACGA
TGGTCCATCA CAACAACTCA ACGGGATGTC GACTTCTCCG CAGCAACTGT TACTGTCACG
CAGGGTTCCA CATCACGCAC CGCTGACATC ATCTACCGAG ACGCTGGAAA TGCGCGCTAT
GGCGACCAAG CGGGAGTCAC ATTCACTGTT CCCGAGTCGA TGCGAACTGT GACGGCTGAC
GGGGAAGCGC GTATCACTGT CACGCTCAGC GGCGTGAGAT CCCAAAGCGG GACATTACCC
GAGGAGACCT ACACGGTGGT GTTGTTCAAC GCTCACTAG
|
|---|
| Protein sequence | MHMRHARPTG PSWIAVALPL ALSTLLISGA AVVATGVLDA PSGQAQAPDL IVPPGRIPQH
YTDPELISAG EDLAAAERDA REDAAQRLAE EKAKEKKAAK QTEAKKKAAA EKKRAAEEQH
AANNSAETPT TGSVAAGTRD ARATILPETG VLDTASRSAV RDAFRTRVAQ HLVDEPQPQV
SGCTVAPTSN ATRERALSAV NFSRALVGLS PVTFSADYNE RSEQAALVQH IQGFLSHSPT
DGDCDLPVGV RTSGEANLSM GTHGARNILA YLEDSGDNNA PVGHRKHILN PGQQEMGIGF
AGQYGALYVF GETSSNNPTP EWIPWPSAGY FPTDMEPQGR WSITTTQRDV DFSAATVTVT
QGSTSRTADI IYRDAGNARY GDQAGVTFTV PESMRTVTAD GEARITVTLS GVRSQSGTLP
EETYTVVLFN AH
|
|---|
| |