Gene Jden_2208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_2208 
Symbol 
ID8381366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp2386533 
End bp2387633 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content60% 
IMG OID645004962 
ProductPfkB domain protein 
Protein accessionYP_003162148 
Protein GI256833421 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0524] Sugar kinases, ribokinase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.235888 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGTGA CCCTACGCCC AGCATCACAA TGCGAGTATG ACGCGGTGTC CTTAGGGGAG 
GTCATGCTGC GGTTTGACCC TGGGGCAGGC CGCATCCGGA CGGCGCGAAG CTTTTCCGTG
TGGGAAGGGG GCGGCGAATA CAACGTGGCA CGTGGATTGC GGCGCGTGTT TGGGTATCGC
ACCGCGATTG TCACCGCGTT AGTGGATAAC GAGGTGGGGC GTTTGGTGGA GGATCTCATG
CTGCAAGGCG GTGTGGATAC TCGGTTCGTG CAGTGGGTGG CCAGTGACGG CATCGGCCGC
ACGGTGCGTA ACGGTTTGAA CTTCACGGAG CGTGGGTTTG GTGTGCGCGG GGCAGTAGGG
GTCTCTGACC GGGGCATCAC TGCGATGTCT CAGATGGCAC CCCATGATGT GGACTGGGAC
GAGCTTTTTG GTGAGCGTGG GGTGCGCTGG TTCCACACGG GTGGGATTTG CGCTGCGCTG
TCGGAGCGCA GCGCAGACAC TGTACTGGCG GCAGTCAAGG CGGCTCGGCG CCATGGCACG
GTTGTGTCGT ATGACTTGAA CTACCGCCCT TCGTTGTGGC AGTCCATTGG TGGGCAGGCG
CGTGCGCAAG AGGTGAACCG TGATATTGCG CGGCATGTTG ATGTGATGAT TGGCAATGAA
GAGGATTTTA TTGCGAGTTT GGGGTGCGCG GTGGACGGGG TTGACGATGC GCTGTCTGAG
TTGGATCCGA ACGCCTACGC TGCCATGATG CGTGAGGTGT CGAGGGAGTT TGATAATTTC
CAGGTGATTG CGACAACGCT CCGTACAGTG CATTCAGCAT CAAGCAATGA TTGGGGCGCC
TTGGCGTGGT CTCGTGAGAC GGGCGTGGAG ATGGCGGCAT TGCGTCCTCG GATGGAAATT
TTTGACCGGG TTGGCGGGGG TGACTCGTTT GCTTCGGGGC TGATCCATGG TTTGTTGCAG
GGGCGGCAAT TGTCGGAGGC GGTGGAGTTC GGTGCGGCGC ATGGTGCGTT GGCGATGACG
ACTCCAGGAG ATACGTCTAT GGTGAGTGCC GCTGAAGTTG AAGTGCTTGC TCGTGGTGGC
AGTGCGCGGG TCGTGCGCTG A
 
Protein sequence
MSVTLRPASQ CEYDAVSLGE VMLRFDPGAG RIRTARSFSV WEGGGEYNVA RGLRRVFGYR 
TAIVTALVDN EVGRLVEDLM LQGGVDTRFV QWVASDGIGR TVRNGLNFTE RGFGVRGAVG
VSDRGITAMS QMAPHDVDWD ELFGERGVRW FHTGGICAAL SERSADTVLA AVKAARRHGT
VVSYDLNYRP SLWQSIGGQA RAQEVNRDIA RHVDVMIGNE EDFIASLGCA VDGVDDALSE
LDPNAYAAMM REVSREFDNF QVIATTLRTV HSASSNDWGA LAWSRETGVE MAALRPRMEI
FDRVGGGDSF ASGLIHGLLQ GRQLSEAVEF GAAHGALAMT TPGDTSMVSA AEVEVLARGG
SARVVR