Gene Jden_2201 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_2201 
Symbol 
ID8381359 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp2376256 
End bp2378868 
Gene Length2613 bp 
Protein Length870 aa 
Translation table11 
GC content63% 
IMG OID645004955 
Productnitrite reductase (NAD(P)H), large subunit 
Protein accessionYP_003162141 
Protein GI256833414 
COG category[C] Energy production and conversion 
COG ID[COG1251] NAD(P)H-nitrite reductase 
TIGRFAM ID[TIGR02374] nitrite reductase [NAD(P)H], large subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.026547 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAGCA CGACACACAT CGTTGTTCTT GGAGGTGGAC CAGCAGCCCA CCGGTTCACC 
GAAGCAATGA CACAGCGCGC ACCGCACGGC GTGACGCTCA CGGTGGTGAC CGAAGAACCG
CATCACCCCT ATGACCGGGT TGCCCTGACC AAAGCGCTCC TGGCCCCCGA CGCCGACCTC
ACACTCGCTG ACCACGTGTG GGACCACCCC ACCGTCACGT TACGGACCGG GGTGCGGGCA
GAATCAATCG ATGTGAACCA CCGCCAGGTG GTCCTCTCCG ATGGTTCCGT CTGTCAGTAT
GACGAACTGG TGCTCGCCAC CGGATCCAAC GCGGCAACCC TCCCCATCCC CGGAGCTGAG
CATTCATTGG TGTACCGCAC CCTTGACGAC GTGTGGACGA TCCACCGTGA CATCACTCGA
TTCCGAGATG AGGGCATCAC CCCACGAGTC GTGACAATCG GTGGTGGGCT CCTCGGGTTG
GAAGCCGCCG CCGGGGCCCG GACACTGGGA GCACAAGCAC ACGTGATTGA TGGTGGTCGC
TGGCTCATGT CCAACCAACT CGATGAAGGG GCTGGCCAAG CCTTAGGGCG CCTTATCGCA
GAAAATGACA TCACCGTGCA CTCAGGGGTC TACCCCCAAG CGGTGACCAC CACAACACAC
GCCACTGGTA CACACCACGT CACCGGCATC GACATGGCAG ACGGATCACA CATCCCCGCC
GACATCGTCA TCACCGCGAT CGGGATTCGC CCCCGCGACG AACTCGCCCG CCACACGAAC
CACACCACAG CACACGAGGT GTTCGCATTA GGTGAACGCG GCGGTATCGT CGTTGACGCC
ACCTGCCACA CCACCGCCCC CCACGTGTGG GCCATCGGTG AAGTCGCCTG CGTCGACGGG
CGCTGTGTCG GACTTGTTGC CCCCGCCAAC GCCATGGCAG AAATCGTCGC CGACCAACTC
GCAGGCGGCA CCGCCACCTT CGACGGATTC GACACCGCCA CCAAACTCAA ACTCTCCGGC
GTCGACGTGG CAAGCTTCGG AGACGCTTTC GCCACCACCC CCGGTGCGCT CGAAGTCGTC
TACGCTGACC CAGCCCGCGG TGTTTACCAA AAAATTGTTG TCTCCGGGGA CGCCACCACC
CTCCTCGGGG GAGTCTTCGT CGGTGACGCA GAACCCTACA CCGTCCTGCG CCCACTCCTC
GGCCGTGAAC TGCCCGCCGA ACCAGGCGCC TACCTCACCG CAGCCAGCAG CGCAGACCTC
CCCGACACCG AACTACCAGA CGATGCCATC CTCTGCTCCT GCAACAACGT CACCGCAGGC
ACAATCCGAG ATGCCATCGG CGGATGCGGA ACCTGCGCCG GACAGGACCC CGTCCGCGAA
CTCACCCCCC TCAAAGCCTG CACCAAAGCA GGAACCCAAT GCGGTTCCTG CGTCCCCATG
CTGAAAAAAC TGCTTGAAAA AGAACTCACT AAAGCAGGCA TCGACGTGTC CACCGCCATG
TGTGAACACA TTGCCATGTC CCGCGCCCAA CTCTTCGAAG CCGTCCGCCT CAGCGACACC
CGCACCTGGA ACGACGTCAT GGACCGCTTC GGCACCGGCA CCGGATGCGA CATCTGCAAA
CCAGCGATCG CGTCCATCCT CGCCACCATC ACCCACACTC ACCCACTCGA CGGCGGACTC
GGCGGATTCC AAGACACCAA CGACCGGGCC CTAGCAAACA TGCAAAAAGA CGGCACCTAC
TCCGTTGTCC CGCGTGTCCC CGGCGGAGAA ATCACCCCTG AGAAACTCGC CGTCATCGCC
GCCGTCGCCC GCAAATACAA CCTCTACACC AAACTCACCG GAGGGCTGCG CATCGACATG
TTCGGAGCCC GCCTCGACCA ACTCCCCGAC ATTTGGCGCG AACTCGTCAA CGCAGGATTC
GAATCAGGGC ACGCCTACGG AAAATCCCTG CGCAACGTCA AAACCTGTGT CGGATCCACC
TGGTGCCGCT ACGGAATGCT CGACTCAGTG GCCATGGGGA TCTCCCTCGA ACTACGCTAC
CGAGGGCTAC GCGCCCCCCA CAAACTCAAA ATGGGTGTCT CCGGATGCGC ACGCGAATGC
GCAGAAGCCC GAGGAAAAGA TGTCGGAGTC ATCGCCACAG CCAACGGATG GAACCTCTAC
GTCGGCGGTA ACGGTGGAGC CACCCCAGCC CACGCCCAAC TCCTCGCCAA AGAAATCGAC
GACACCACCC TCATCCGCTA CATCGACCGC TTCCTCATGT ACTACATTCG CACCGCCGAC
CGACTCCAGC GCACCGCCCG ATGGCTCGAA GACCTCGACG GTGGGATCGA CCGAGTCAAA
GACGTCGTCG TCAACGACTG CCTCGAACTC GGCGAAGAAC TCGAAACAGC AATGAACGAC
CACGTCGCCG CCTACGAAGA CGAATGGGCC GCAGTCCTCA ACGACCCCGA CCGGCTCCGC
CGCTTCACCT CCTTCGTCAA CACCACCACC CCCGACCCAA CACTGACCTA CGACACCGAA
CGAGGCCAAC GCAGACCCGC ATCGCCCATC CCACTCGGTG CCACCATCCC CACCGGTGCA
CCCACCACCC AACCAGAGGA GACCACCCCA TGA
 
Protein sequence
MASTTHIVVL GGGPAAHRFT EAMTQRAPHG VTLTVVTEEP HHPYDRVALT KALLAPDADL 
TLADHVWDHP TVTLRTGVRA ESIDVNHRQV VLSDGSVCQY DELVLATGSN AATLPIPGAE
HSLVYRTLDD VWTIHRDITR FRDEGITPRV VTIGGGLLGL EAAAGARTLG AQAHVIDGGR
WLMSNQLDEG AGQALGRLIA ENDITVHSGV YPQAVTTTTH ATGTHHVTGI DMADGSHIPA
DIVITAIGIR PRDELARHTN HTTAHEVFAL GERGGIVVDA TCHTTAPHVW AIGEVACVDG
RCVGLVAPAN AMAEIVADQL AGGTATFDGF DTATKLKLSG VDVASFGDAF ATTPGALEVV
YADPARGVYQ KIVVSGDATT LLGGVFVGDA EPYTVLRPLL GRELPAEPGA YLTAASSADL
PDTELPDDAI LCSCNNVTAG TIRDAIGGCG TCAGQDPVRE LTPLKACTKA GTQCGSCVPM
LKKLLEKELT KAGIDVSTAM CEHIAMSRAQ LFEAVRLSDT RTWNDVMDRF GTGTGCDICK
PAIASILATI THTHPLDGGL GGFQDTNDRA LANMQKDGTY SVVPRVPGGE ITPEKLAVIA
AVARKYNLYT KLTGGLRIDM FGARLDQLPD IWRELVNAGF ESGHAYGKSL RNVKTCVGST
WCRYGMLDSV AMGISLELRY RGLRAPHKLK MGVSGCAREC AEARGKDVGV IATANGWNLY
VGGNGGATPA HAQLLAKEID DTTLIRYIDR FLMYYIRTAD RLQRTARWLE DLDGGIDRVK
DVVVNDCLEL GEELETAMND HVAAYEDEWA AVLNDPDRLR RFTSFVNTTT PDPTLTYDTE
RGQRRPASPI PLGATIPTGA PTTQPEETTP