Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_2201 |
Symbol | |
ID | 8381359 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | - |
Start bp | 2376256 |
End bp | 2378868 |
Gene Length | 2613 bp |
Protein Length | 870 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 645004955 |
Product | nitrite reductase (NAD(P)H), large subunit |
Protein accession | YP_003162141 |
Protein GI | 256833414 |
COG category | [C] Energy production and conversion |
COG ID | [COG1251] NAD(P)H-nitrite reductase |
TIGRFAM ID | [TIGR02374] nitrite reductase [NAD(P)H], large subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.026547 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAGCA CGACACACAT CGTTGTTCTT GGAGGTGGAC CAGCAGCCCA CCGGTTCACC GAAGCAATGA CACAGCGCGC ACCGCACGGC GTGACGCTCA CGGTGGTGAC CGAAGAACCG CATCACCCCT ATGACCGGGT TGCCCTGACC AAAGCGCTCC TGGCCCCCGA CGCCGACCTC ACACTCGCTG ACCACGTGTG GGACCACCCC ACCGTCACGT TACGGACCGG GGTGCGGGCA GAATCAATCG ATGTGAACCA CCGCCAGGTG GTCCTCTCCG ATGGTTCCGT CTGTCAGTAT GACGAACTGG TGCTCGCCAC CGGATCCAAC GCGGCAACCC TCCCCATCCC CGGAGCTGAG CATTCATTGG TGTACCGCAC CCTTGACGAC GTGTGGACGA TCCACCGTGA CATCACTCGA TTCCGAGATG AGGGCATCAC CCCACGAGTC GTGACAATCG GTGGTGGGCT CCTCGGGTTG GAAGCCGCCG CCGGGGCCCG GACACTGGGA GCACAAGCAC ACGTGATTGA TGGTGGTCGC TGGCTCATGT CCAACCAACT CGATGAAGGG GCTGGCCAAG CCTTAGGGCG CCTTATCGCA GAAAATGACA TCACCGTGCA CTCAGGGGTC TACCCCCAAG CGGTGACCAC CACAACACAC GCCACTGGTA CACACCACGT CACCGGCATC GACATGGCAG ACGGATCACA CATCCCCGCC GACATCGTCA TCACCGCGAT CGGGATTCGC CCCCGCGACG AACTCGCCCG CCACACGAAC CACACCACAG CACACGAGGT GTTCGCATTA GGTGAACGCG GCGGTATCGT CGTTGACGCC ACCTGCCACA CCACCGCCCC CCACGTGTGG GCCATCGGTG AAGTCGCCTG CGTCGACGGG CGCTGTGTCG GACTTGTTGC CCCCGCCAAC GCCATGGCAG AAATCGTCGC CGACCAACTC GCAGGCGGCA CCGCCACCTT CGACGGATTC GACACCGCCA CCAAACTCAA ACTCTCCGGC GTCGACGTGG CAAGCTTCGG AGACGCTTTC GCCACCACCC CCGGTGCGCT CGAAGTCGTC TACGCTGACC CAGCCCGCGG TGTTTACCAA AAAATTGTTG TCTCCGGGGA CGCCACCACC CTCCTCGGGG GAGTCTTCGT CGGTGACGCA GAACCCTACA CCGTCCTGCG CCCACTCCTC GGCCGTGAAC TGCCCGCCGA ACCAGGCGCC TACCTCACCG CAGCCAGCAG CGCAGACCTC CCCGACACCG AACTACCAGA CGATGCCATC CTCTGCTCCT GCAACAACGT CACCGCAGGC ACAATCCGAG ATGCCATCGG CGGATGCGGA ACCTGCGCCG GACAGGACCC CGTCCGCGAA CTCACCCCCC TCAAAGCCTG CACCAAAGCA GGAACCCAAT GCGGTTCCTG CGTCCCCATG CTGAAAAAAC TGCTTGAAAA AGAACTCACT AAAGCAGGCA TCGACGTGTC CACCGCCATG TGTGAACACA TTGCCATGTC CCGCGCCCAA CTCTTCGAAG CCGTCCGCCT CAGCGACACC CGCACCTGGA ACGACGTCAT GGACCGCTTC GGCACCGGCA CCGGATGCGA CATCTGCAAA CCAGCGATCG CGTCCATCCT CGCCACCATC ACCCACACTC ACCCACTCGA CGGCGGACTC GGCGGATTCC AAGACACCAA CGACCGGGCC CTAGCAAACA TGCAAAAAGA CGGCACCTAC TCCGTTGTCC CGCGTGTCCC CGGCGGAGAA ATCACCCCTG AGAAACTCGC CGTCATCGCC GCCGTCGCCC GCAAATACAA CCTCTACACC AAACTCACCG GAGGGCTGCG CATCGACATG TTCGGAGCCC GCCTCGACCA ACTCCCCGAC ATTTGGCGCG AACTCGTCAA CGCAGGATTC GAATCAGGGC ACGCCTACGG AAAATCCCTG CGCAACGTCA AAACCTGTGT CGGATCCACC TGGTGCCGCT ACGGAATGCT CGACTCAGTG GCCATGGGGA TCTCCCTCGA ACTACGCTAC CGAGGGCTAC GCGCCCCCCA CAAACTCAAA ATGGGTGTCT CCGGATGCGC ACGCGAATGC GCAGAAGCCC GAGGAAAAGA TGTCGGAGTC ATCGCCACAG CCAACGGATG GAACCTCTAC GTCGGCGGTA ACGGTGGAGC CACCCCAGCC CACGCCCAAC TCCTCGCCAA AGAAATCGAC GACACCACCC TCATCCGCTA CATCGACCGC TTCCTCATGT ACTACATTCG CACCGCCGAC CGACTCCAGC GCACCGCCCG ATGGCTCGAA GACCTCGACG GTGGGATCGA CCGAGTCAAA GACGTCGTCG TCAACGACTG CCTCGAACTC GGCGAAGAAC TCGAAACAGC AATGAACGAC CACGTCGCCG CCTACGAAGA CGAATGGGCC GCAGTCCTCA ACGACCCCGA CCGGCTCCGC CGCTTCACCT CCTTCGTCAA CACCACCACC CCCGACCCAA CACTGACCTA CGACACCGAA CGAGGCCAAC GCAGACCCGC ATCGCCCATC CCACTCGGTG CCACCATCCC CACCGGTGCA CCCACCACCC AACCAGAGGA GACCACCCCA TGA
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Protein sequence | MASTTHIVVL GGGPAAHRFT EAMTQRAPHG VTLTVVTEEP HHPYDRVALT KALLAPDADL TLADHVWDHP TVTLRTGVRA ESIDVNHRQV VLSDGSVCQY DELVLATGSN AATLPIPGAE HSLVYRTLDD VWTIHRDITR FRDEGITPRV VTIGGGLLGL EAAAGARTLG AQAHVIDGGR WLMSNQLDEG AGQALGRLIA ENDITVHSGV YPQAVTTTTH ATGTHHVTGI DMADGSHIPA DIVITAIGIR PRDELARHTN HTTAHEVFAL GERGGIVVDA TCHTTAPHVW AIGEVACVDG RCVGLVAPAN AMAEIVADQL AGGTATFDGF DTATKLKLSG VDVASFGDAF ATTPGALEVV YADPARGVYQ KIVVSGDATT LLGGVFVGDA EPYTVLRPLL GRELPAEPGA YLTAASSADL PDTELPDDAI LCSCNNVTAG TIRDAIGGCG TCAGQDPVRE LTPLKACTKA GTQCGSCVPM LKKLLEKELT KAGIDVSTAM CEHIAMSRAQ LFEAVRLSDT RTWNDVMDRF GTGTGCDICK PAIASILATI THTHPLDGGL GGFQDTNDRA LANMQKDGTY SVVPRVPGGE ITPEKLAVIA AVARKYNLYT KLTGGLRIDM FGARLDQLPD IWRELVNAGF ESGHAYGKSL RNVKTCVGST WCRYGMLDSV AMGISLELRY RGLRAPHKLK MGVSGCAREC AEARGKDVGV IATANGWNLY VGGNGGATPA HAQLLAKEID DTTLIRYIDR FLMYYIRTAD RLQRTARWLE DLDGGIDRVK DVVVNDCLEL GEELETAMND HVAAYEDEWA AVLNDPDRLR RFTSFVNTTT PDPTLTYDTE RGQRRPASPI PLGATIPTGA PTTQPEETTP
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