| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_2178 |
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| Symbol | |
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| ID | 8381336 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 2352155 |
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| End bp | 2356183 |
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| Gene Length | 4029 bp |
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| Protein Length | 1342 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 645004931 |
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| Product | phage tail tape measure protein, TP901 family |
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| Protein accession | YP_003162118 |
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| Protein GI | 256833391 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5283] Phage-related tail protein |
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| TIGRFAM ID | [TIGR01760] phage tail tape measure protein, TP901 family, core region |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGATC GGTCTATCAA AGTAAGGCTC GAAGCCGAGG TGGGTGGATA CAAGCGGGGC
ATGTCTGATG CTGCTCGTGC CACTGACAAC CTAGCTAAAT CTCAGAAGGG TGCCTTGGAG
CGGACCAGTG CGTTTTGGCA GGCCAACCGT GCGGACATTG ACCAGGTTGG GTCTTCTTTG
GCTGTGATGG GGGCTGCTGG GACTGCTGCG CTGGCCGGGG TGACGAAGCT GGCGATGGAT
TGGGAATCTG CGTGGGCCGG GGTCACGAAG ACCGTTGATG GGACAGCTGA AGAAATGGCT
TCCCTGGAAA AAGGTTTGCG TGGTTTAGCG AAGGTCCTGC CTGCTTCTCA CACTGAGATC
GCGGCGGTGG CGGAGGCTGC TGGGCAGCTT GGTGTGGAGA CGAAGAATGT GCAGGGATTT
ACCCGCACAA TGATTGATCT CGGGGAGACC ACAAACCTCT CTGCGAATGA TGCCGCCACA
CAGCTTTCCC GGTTTATGAA TATCATGGGG TCCTCGCAAA GTGACGTGGA CCGCCTGGGG
TCATCCGTGG TCGGCTTGGG TAATAACTTT GCGACTACTG AGGCTGAAAT TGTTGAGCTT
GGTATGCGTC TTGCCGGTGC AGGGAAGCAG GCTGGCCTGT CTGAGTCCGA TGTGCTGGGT
TTTGCTACCG CGATGTCGTC GGTGGGTATC GAGGCTGAGG CTGGTGGTAC GGCACTGTCG
ATGACGATGA AGCGGATTGG GTCTGAGGTT GAGACTAATG GTGCGCTTTT GGGGACGTTC
GCGCAGGTAG CGGGCATGTC GGCGGAGCAA TTTAAGACTG CTTGGGGCCA GGATGCTGCC
GGGGCTTTGT CTGCTTTCAT CGCTGGGCTT GGGCAGACGG AATCTTTGGG TATGTCAGCG
AACGCTGTTT TGTCTGAGCT TGGCATCACC GGTATTCGTG AGTCTGACTC CCTGCTGCGT
TTGTCGAGTG CGCAGGGTCT TGTGAATGAG GCTTTGGCTA CTGGTGCGAC CGCTTATGCG
GAGAATACTG CTTTGTCTGA TGAGGCTGCG AAGCGTTATG AGACGACTGC GGCTAAGGCT
GAGATGGCTT GGAACGCCAT GAAGGACGCG GGGATCGAGT TTGGGTCTTA CGTCCTGCCG
GTTTTGGCTC AAGCGGCGGA GGGCGTCGCT GATTTGGCTG GCTGGTTTGC TCAGTTGCCG
GAGCCGGTGA AGCAGGTAGT CACTGGGCTG GGTGGGTTGG CTTCGGTGGC GGCTTTGGCT
GCTGGTGGTG CGTTACGCCT GGCCGGGTCC GTCTCTGACT CTTACCTTGC AATGAAGCGG
CTATCAGCGG AAGCGCCGCG TCTTGCGTCT GGGTTGAAGC GTGTGGGTAT CGCTGCTGGT
GTGGCTGGTG CCGCTTTGAC TGCGTTTGCT ATTGGTCAAG CGTATGACGG TGGTGAGGCT
ACCCAGGGGT TGCAGGAGAT TGAGGACGGT CTTAAGCGTG TCGCTAAAGG TGCGTCCGCT
GCGGACACGG TTTTCAAGAA TTTTGATGAG CGGAAGATCT GGGAATCTGA TGTTCAGGGG
CTGCGTGATG CGGAGGAGAT TCTTGATCGT ATAAGCCAGA ACACTCTTTT TGGTGACGCT
CAGCGCGGCC TTCTAAGTGG GATTAATGGG CTGACTGATC TGTTCGGGTA TGACTCGCGT
ACGGATTTGC AGAAGCAAGA GCAGGATTTG CGTGCGTATT TGGACACGCT CGCCACGCAG
GTGCCGTCTG CGACGGCTGA TGCTATTGCT GCTTTCCAGG GCTTGAACGA GCAGGTGGGC
GGCACGGATG ACTCTGCCCA GAAGCTGATT AATGCGTCAC CAGCTTTAAA GGACGCTCTT
ATCGGCGTGG CGTCTGAGGC CGGGTACACG ACTGATGATG CTTCACTTTT GGCGATTGCT
TTGGGTGAGG TCGAGATCGC GGCTGATGAG GTTGATTCGT CTACTCGTGG GGCTGCGTCT
GCTGCTGTGG CTGCTGCTGA GGCGATGCAG GCTGAGGCTG ATGCGGCTAA TGCTGCTGCT
GAGGCGGTTT TGGCGAAGGC TCGGGCTAAT GCTGATGGGA TTTCCGCGGA GATTCGTTTT
GAGGAGGCTA CTGATCGGGC GCGGGCGACG ATTGAGGAGA ATGGTAAAGC GACTGATTTG
AGTACTGAGA AGGGCCGCCA GAATATGGAG GCTTTGCTTG GTATGGCTGA TGCGACTTTG
GGTGCTGCTG AGCAGATGAG TGCTTTGGGT GCGTCGCAGG AGGCTGTGGA CGGGAAGATC
GAGGCTGGCC GTAAGCGTTT TGAGTCTTTG GCTCGTGCGG CTGGTTTTTC TAGGGAGCAG
GTTGCTTCTA TGTCTCGGGA GCTTGGGTTG GTGCCTGGGA CGGTGACGAC TCAGGTTCAG
GTTTTGAATG TTGGTGGCGC GATTTCGCAG GTCCAGGCGC TGAATTCCAC TCTTAATTCG
ATTAATGGGA AGACGGTTAC TGCTGCTGTT GCTATTAAGC AGTATGGGCA GGCGGCGATG
GCGGATGGTG GTGTGCGTGA GCGTGCTGCT GGTGCTTTGG ATGAGCCGCA GATCCGTCCG
GGTTCTGGTG CAGGTGTCAC GCAGGTTTCA CGTTTTGGTC CGGTGACTTG GGCTGAGGGT
GAGACTGAGT GGGAGGCTTT TATTCCTGGT GCGCGGTCGA AGCGTGGTCG GGCGTTGGCG
ATTTGGCGTG AGGCCGGTCA GCGTTTGGGG GCGTTTGAGG CGCTTGGTGC TGAGTCTTTC
GCGGCTGGTG GTTTACGGTC GTCTGCGTCT TTGCGTACTG CGGAGCGCAG GGTGAAGCGT
CTGGTGTCTC AGGTGCGGTC TTCTCGCCGG TCTGGGAATG ACAAGCGGAC CAGGAAACTG
GAGGATCAGC TGCGGGACGC ACGGTCGGCT TTGGCTGATT TGCGTGACGC ACGGGTCGAT
TTGGCTTTGG ATGCGCGGCG TGGGCGTTTG TCTGAGCAGG CGTCGGGCGG TTTGTCGTCG
GCTTATTCGC TGGTGGATCA GGTGCGTGAC GCTGCCGGGG ATTCCGCTCT CACGAAGGGC
ACACGTAAGA GCCTGTCGTC GGCTGCTAAG TCATCTGAGG TGGCTTTCCG GAAGCTGTAT
GCGACTGCTG AGCGGGTCGA GGTCGCGCTT GAGAAGGCGC GGGATCACTT GCAGGAGATG
CAGCAGATTT CGGATGGTCT GAAATCGTCG CTGTCGGGCG GTTTCCAGCT GACGGACGCT
TACACGCAGT GGTCGGACGG TCTCGGGAAT GTGGCGGGAA AGAGTATTAC CGCTGCTGGG
ATGGTTGCGG GCGGTAAATC GTATGCGGAC AAGCTGAAGA AGTTTGGGGC GTCGATTAAG
AAGCTCGCGG ACTTTGGGCT GTCATCCGTG GTGCTCCAGG AGATCGCGGC TTTGGGTCCT
GATGAGGGGC TTGAGGTCGC TAATCAGCTG TTGGCCGGGG GTAAGAAATC GGTCCAAGAA
CTCAACGGGG TTTACACCTC GATTGCGTCT GCGTCCGGTT TCATCGGCGA CCAGGCCACC
CGGAATTACC GTACAGCCGA TGGCACTTTC TACGCGGGCG GCGTCGGGCA GGCTCAAGGC
CGTGTGGATT CCCTGGAGAA GTCGATGAGC AAGATTGAGG CTTCTATCGG GAAGTGGGGT
GACAAGATTG CCCGGATTTT GGGTAAGGCG TATGGGGTGA AGATGGCGTC TGGCGGCTGG
GTGACTGGCG GCATTAAGGG CGTCGATTCG GTGCCTATCA CTGCGATGCC AGATGAGTAT
GTGGTCAACG CCAAGGCCGC TTCACAGTAT GGGCCTTTGC TTGAGTCGAT TAACTCTGGA
CGCGGGTTGC CTGTCCTGTC TGCTGCTTAC CCTGCACAAA CCAACGTCAA CGTCGCCCTT
GATAAAGGGT CTTTGGCGGG TGCTTTGGAT GGCGTCGGCG TGACGATGCT GGTTGATGGG
AAGCCTATGA AAGCGACGAT CCGCACGGAA ATGAACGCCG CTTTTAGTGC GGCTGGGAGG
GGTTACTGA
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| Protein sequence | MADRSIKVRL EAEVGGYKRG MSDAARATDN LAKSQKGALE RTSAFWQANR ADIDQVGSSL
AVMGAAGTAA LAGVTKLAMD WESAWAGVTK TVDGTAEEMA SLEKGLRGLA KVLPASHTEI
AAVAEAAGQL GVETKNVQGF TRTMIDLGET TNLSANDAAT QLSRFMNIMG SSQSDVDRLG
SSVVGLGNNF ATTEAEIVEL GMRLAGAGKQ AGLSESDVLG FATAMSSVGI EAEAGGTALS
MTMKRIGSEV ETNGALLGTF AQVAGMSAEQ FKTAWGQDAA GALSAFIAGL GQTESLGMSA
NAVLSELGIT GIRESDSLLR LSSAQGLVNE ALATGATAYA ENTALSDEAA KRYETTAAKA
EMAWNAMKDA GIEFGSYVLP VLAQAAEGVA DLAGWFAQLP EPVKQVVTGL GGLASVAALA
AGGALRLAGS VSDSYLAMKR LSAEAPRLAS GLKRVGIAAG VAGAALTAFA IGQAYDGGEA
TQGLQEIEDG LKRVAKGASA ADTVFKNFDE RKIWESDVQG LRDAEEILDR ISQNTLFGDA
QRGLLSGING LTDLFGYDSR TDLQKQEQDL RAYLDTLATQ VPSATADAIA AFQGLNEQVG
GTDDSAQKLI NASPALKDAL IGVASEAGYT TDDASLLAIA LGEVEIAADE VDSSTRGAAS
AAVAAAEAMQ AEADAANAAA EAVLAKARAN ADGISAEIRF EEATDRARAT IEENGKATDL
STEKGRQNME ALLGMADATL GAAEQMSALG ASQEAVDGKI EAGRKRFESL ARAAGFSREQ
VASMSRELGL VPGTVTTQVQ VLNVGGAISQ VQALNSTLNS INGKTVTAAV AIKQYGQAAM
ADGGVRERAA GALDEPQIRP GSGAGVTQVS RFGPVTWAEG ETEWEAFIPG ARSKRGRALA
IWREAGQRLG AFEALGAESF AAGGLRSSAS LRTAERRVKR LVSQVRSSRR SGNDKRTRKL
EDQLRDARSA LADLRDARVD LALDARRGRL SEQASGGLSS AYSLVDQVRD AAGDSALTKG
TRKSLSSAAK SSEVAFRKLY ATAERVEVAL EKARDHLQEM QQISDGLKSS LSGGFQLTDA
YTQWSDGLGN VAGKSITAAG MVAGGKSYAD KLKKFGASIK KLADFGLSSV VLQEIAALGP
DEGLEVANQL LAGGKKSVQE LNGVYTSIAS ASGFIGDQAT RNYRTADGTF YAGGVGQAQG
RVDSLEKSMS KIEASIGKWG DKIARILGKA YGVKMASGGW VTGGIKGVDS VPITAMPDEY
VVNAKAASQY GPLLESINSG RGLPVLSAAY PAQTNVNVAL DKGSLAGALD GVGVTMLVDG
KPMKATIRTE MNAAFSAAGR GY
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