Gene Jden_2163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_2163 
Symbol 
ID8381321 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp2341943 
End bp2342512 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content57% 
IMG OID645004916 
Producthypothetical protein 
Protein accessionYP_003162103 
Protein GI256833376 
COG category[S] Function unknown 
COG ID[COG4983] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.140671 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAAAG CGTGTGAGTC GTGCGGGAAG CGCATTGAGC TGGCTGGGAC TGGACGCCCG 
AAGCGGTTCT GTGGTCAAAC GTGCCGTAAG CGTGCTTCTC GTGCCCCTAA GACTGGCCTG
CCGGTGGAGC TTACGTCTCG TGCCCGGTGG GTGCGTCGGC AGGGTAAGCG TCCTTTGACG
GCGAAGGGTT GGTTTGCTTC TGTGACTGAC CCTAGGACGT GGGCTACTCA CGATGAAGTG
AAGGCTTCCA CGAAGGGCGA TGGTATTGGT TTCGTGCTTG GTGATGGGGT TGGGTGTATC
GACCTTGACC ACTGCATCGT GAATGGTGAA CTACAGGGTT GGGCGCGTGA CATTTTGGAT
CGCTGCCCCC CAACGTTCGT GGAAGTGTCT CAGTCGGGTA CTGGGTTACA CATTTTCGGT
CTACTCCGTG AGGGGAAGGG CCGTGGTCAG CGTGGCGGTG ATGGTGTCGA GTTTTACTCC
ACTGGCCGTT ATATCGCGGT GACTGGTGAT GCTTTTGAGA AGTCAGTTCT TCGTCTTGGT
GATCTGACTG AGGTCGTTTC CACGCTGTAA
 
Protein sequence
MSKACESCGK RIELAGTGRP KRFCGQTCRK RASRAPKTGL PVELTSRARW VRRQGKRPLT 
AKGWFASVTD PRTWATHDEV KASTKGDGIG FVLGDGVGCI DLDHCIVNGE LQGWARDILD
RCPPTFVEVS QSGTGLHIFG LLREGKGRGQ RGGDGVEFYS TGRYIAVTGD AFEKSVLRLG
DLTEVVSTL