| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_2117 |
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| Symbol | |
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| ID | 8381275 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 2311160 |
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| End bp | 2314081 |
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| Gene Length | 2922 bp |
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| Protein Length | 973 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 645004869 |
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| Product | D-lactate dehydrogenase (cytochrome) |
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| Protein accession | YP_003162057 |
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| Protein GI | 256833330 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.715118 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACAAACG TGGTGGATTC CCAACAGTCA GGTTCGTCTT CGTCTCATCC CAGCGTCGAG
GCGCGCGCAG AGTTGGTTGA CCAACTCCGG CGTGCAGTCG ACGGCGAGGT GTCAGATTCC
TCGTTGCGTC GTGCTGAGTA TTCCACCGAC GCTTCAAACT ATCGTGTTGT TCCACAAGTT
GTCGTCATAC CGAAGACTAT TGATGACGCC CGTGCAGCGA TCGAGGTAAC CCACCAGTTC
GGTGTTCCCT TAACAACACG CGGCGCCGGA ACCTCCTGCG CCGGGAACTC CATTGGTCCC
GGTGTTGTCA TCGACTTCTC CCGCCACGTC AACCGCGTCC TTGACATCGA CCCCACCGAA
CGGATCGCGC GAGTAGAACC AGGCGTGATC ATGGGATCAC TTCAAGCCGC AGCGCGCCCC
TACGGGTTAC GGTTCGGACC AGACCCCTCC ACCCAAAACC GGGCGACCTT GGGCGGAATG
ATCGGTAACA ATGCGTGCGG CCCGCACGCA GTCGCCTACG GGCGCACGGC CGATAACGTC
GTCAGTTTGG ATGTCATTGA CGGTCGCGGC GAACGTTTCA CCGCAGGGGC TGACGGTCAG
GGAATCGAGC GGGTCCCCGG TCTTGACCAG CTTGTGACCG CGAACCTTGC CCAGATCCGT
ACCGAATTTG GCCGGTTCTC CCGGCAGGTA TCCGGCTACT CCCTCGAGCA CCTTCTGCCC
GAAAATGGCC GCAACCTCGC CCGGATGCTC ACCGGCACAG AAGGCACACT GGTGTCCATT
CTTGAGGCCA CTGTCTCCCT TGTCCCCATC GCAGACGCCC CCACCCTCGT CGTGCTGGGT
TACCCCGATA TGGCCTCAGC TGCCGATGCG GTCCCTGGGT TGCTCGCGCA TCGGCCGTTG
GCAGTTGAAG GGCTTGACGC TCGCCTTGTT GAGGTTGTCC GGCGCGCAAA AGGAGCGCAG
AACGTCCCCG ATCTACCCCC AGGCGGCGGT TGGATGATGG TCGAAGTTGG GGGCGACAAC
GCCGCCGAAG CGATGGAGCG CGCCCATACG CTAGCGAAAG ACTCCGGAAC AACTCACTAC
AAGGTGTACC CGGCAGGCCC AGAAGCAACC AAAATGTGGC AAATCCGTGC TGACGGTGCC
GGGCTAGCGG GGCGCACCGC ATCGGGGGAC CAAGCATGGC CCGGCTGGGA AGACTCCGCA
GTGCCCCCCG AGAAACTCGG CGCCTATCTC CGTGACCTCG ACGAACTCAT GAAAAGCCAC
AACGTCGACG GCATGCCCTA CGGCCACTTC GGGGACGGAT GCGTCCACCT GCGCATCAAC
ATCCCACTCG AACGTGACGG ATCAGTACTT ACCCACTTCA TGACCGACGC AGCACAGCTG
GTCGCCCAAT ACGGCGGCTC CCTATCTGGA GAGCACGGAG ATGGGCGCGC TCGCTCGCAG
CTACTCGATG TCATGTATTC GGCCGACACG ATTGCGTTGT TCCGGGGCGT GAAAGACCTG
TTTGACCCGA AGGGGTTGCT CAACCCGGGT GTGCTGGTGG ACCCTGACCC ACTGGACGCG
AACCTGCGGC GCCCGGCAGC GAAGCCGTTG CCGGCGGCGA ATGGGTTCTC GTTCCTTCAC
GATGACGGTG ACATGTCCAC CGCGGTTCAC CGGTGTGTCG GGGTGGGCAA ATGCCGCGCG
GACAATATGT CGACCGGAGC TGGGTTCATG TGCCCGTCCT ACCAGGCCAC CAAGGACGAA
AAAGACTCCA CACGTGGGCG CGCCCGAGTT CTGCAGGAGA TGGCGAATGG CACGTTAGTG
ACAGGCGGCT GGCGGTCACC AGAAGTCCAT GAAGCACTCG ACCTGTGTTT GTCGTGCAAA
GCGTGCTCCA GTGACTGCCC TGCTGGGGTG GACATGGCTC AGTTTAAATC TGAGGTCCTC
TACCGGTCCT ACAAGGGGCG GGTTCGCCCC CGCAGTCACT ACATTCTGGG GTGGCTACCC
AGGTGGCTGC GCCTCATCAA ACGAATGCCG CGTCTGGCTA ACGCCGTTCT GAAGGTGCCG
CTGTTTGCAC GCTTAGCCGC GTTCACTGGG GGGATGGACG CCCGCCGGTC GTTCCCGAGC
TTCGCGGATC AACCCTTCAC CGCCTGGTGG CGCAAAGAAG GCCGGGAACA ACTCGCTGAC
GCTGTCACCC AAGCGAAAGG CCCTCAGACC CTCAAGGAAC GCGGCGGCCC TACCGTTGTG
TTGTGGACGG ATTCATTTTC CGATGCGCTT GCCCCCGCCG TCCCCAAAGC TGCACTCAAG
GTGCTCACAA CCGCCGGGTA CAATGTGGTC ATCCCCGAAG ACGAAGCATG CTGCGGGTTG
ACGTGGATCA CCACAGGTCA ACTTGATGGG GCCAAAAAAC AACTGTCCAA CCTCCTTGAT
GTGCTCGGTC CATTCGCTGT CAACGGGATC CCCATTGTGG GACTAGAACC CAGCTGCACC
GCCGTGCTGC GCTCCGACCT GGTCGACCTC TTCCCCAACG ACCCCCGCGC CCACGCAGTT
GCCGCCGCAA CCAACACCAT GGCGGAACTC CTCACCAACG AGGACACCAA ACCGCAGGAC
TGGCACATCC CTGACCTCTC CGATGTGACA GCTGTCGTGC AACCACACTG TCACCAACAC
TCCGTCATGG GATTCACCGC AGACAAAGAC CTCCTCACCA AGGCAGGCGC AACCATCCGT
ACCATGTCCG GGTGTTGCGG ACTCGCCGGG AACTTCGGCA TGGAAAAAGG CCACTACGAG
GTGTCCGTTG CTGTGGCAGA GAATATGCTT TTGCCTGCAC TGCGGGAAGC AGGAGAAGAC
GATATTTTCA TGACGGACGG TTTCTCCTGC CGCACCCAAG TCAACGACCT TATGGATATT
CGCGGCCGGT CACTGTCTGA GGTGATCGCC GACCATCTGT AA
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| Protein sequence | MTNVVDSQQS GSSSSHPSVE ARAELVDQLR RAVDGEVSDS SLRRAEYSTD ASNYRVVPQV
VVIPKTIDDA RAAIEVTHQF GVPLTTRGAG TSCAGNSIGP GVVIDFSRHV NRVLDIDPTE
RIARVEPGVI MGSLQAAARP YGLRFGPDPS TQNRATLGGM IGNNACGPHA VAYGRTADNV
VSLDVIDGRG ERFTAGADGQ GIERVPGLDQ LVTANLAQIR TEFGRFSRQV SGYSLEHLLP
ENGRNLARML TGTEGTLVSI LEATVSLVPI ADAPTLVVLG YPDMASAADA VPGLLAHRPL
AVEGLDARLV EVVRRAKGAQ NVPDLPPGGG WMMVEVGGDN AAEAMERAHT LAKDSGTTHY
KVYPAGPEAT KMWQIRADGA GLAGRTASGD QAWPGWEDSA VPPEKLGAYL RDLDELMKSH
NVDGMPYGHF GDGCVHLRIN IPLERDGSVL THFMTDAAQL VAQYGGSLSG EHGDGRARSQ
LLDVMYSADT IALFRGVKDL FDPKGLLNPG VLVDPDPLDA NLRRPAAKPL PAANGFSFLH
DDGDMSTAVH RCVGVGKCRA DNMSTGAGFM CPSYQATKDE KDSTRGRARV LQEMANGTLV
TGGWRSPEVH EALDLCLSCK ACSSDCPAGV DMAQFKSEVL YRSYKGRVRP RSHYILGWLP
RWLRLIKRMP RLANAVLKVP LFARLAAFTG GMDARRSFPS FADQPFTAWW RKEGREQLAD
AVTQAKGPQT LKERGGPTVV LWTDSFSDAL APAVPKAALK VLTTAGYNVV IPEDEACCGL
TWITTGQLDG AKKQLSNLLD VLGPFAVNGI PIVGLEPSCT AVLRSDLVDL FPNDPRAHAV
AAATNTMAEL LTNEDTKPQD WHIPDLSDVT AVVQPHCHQH SVMGFTADKD LLTKAGATIR
TMSGCCGLAG NFGMEKGHYE VSVAVAENML LPALREAGED DIFMTDGFSC RTQVNDLMDI
RGRSLSEVIA DHL
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