Gene Jden_2106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_2106 
Symbol 
ID8381264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp2298986 
End bp2300005 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content64% 
IMG OID645004858 
ProducttRNA(Ile)-lysidine synthetase 
Protein accessionYP_003162046 
Protein GI256833319 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0037] Predicted ATPase of the PP-loop superfamily implicated in cell cycle control 
TIGRFAM ID[TIGR02432] tRNA(Ile)-lysidine synthetase, N-terminal domain 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATACC TCCCTCCCGC GCTCGCGCAG GCGCGGACCG CGCTCACCTC CATGATGGCC 
GATGCGCCTC CCGGTACCCG CGTTGCAGTG GCCTGCTCCG GTGGCGCTGA CTCCCTGGCC
GTTGCTGCGA CCCTTGCGCA TGTTGGACCA CGCCGCGGAT GGCAGATCAG CGCCTTCATT
GTGGACCACG ACCTGCATCC AGATTCTGCT CAGGTGAGCG TGGTGGCCGC ACGGCAACTG
ATTGACCTGG GGTTTCCCCA CGTGACCATC ACCCGGGTCA CGGTTGCGCA CGGACCTGGC
CATGGCGGCC CAGAAGCGGC TGCCCGCACA GCGCGCTACG CCGCACTGGA TCGACTTCGC
ACCCAACACG GCGTGGACGT CATCCTTCTC GGCCACACCC GCGATGACCA AGCAGAGTCC
GTCCTGCTTG GTTTGGCCCG CGGTTCCGGG GCACGCTCCT TATCCGGGAT CAGACCTCGC
ACCGGCCACT ATGTACGTCC CTTTCTCTCC CTGACTCGCG CCGCCACAGA AGAGATCTGT
TCTCTGCATG AGGTCAACGT CTGGCATGAC CCCACAAACA CCGATATCAC CCCTCAAGGA
CCGCTGCGCT CCCAGGTGCG CGGAGTTGTG ATCCCCCTCA TGGAGAACGT GTTGGGGCCA
GGTGTCGCTG ATGCTCTCGC ACGCACTGCG GACCTCCTCC ATGCTGACGC TGAAGCGCTT
GAGCAATGGG CCCGTACCGC ACAAGCCGAT GTGACAATCA CCACCACCAA CACGGCTGAG
GGGCAGGTGC ACCTTGACCT CACCGCGCTC GCTGCCCTCC CAACCGCCAT TCGGCACCGG
GTACTGCGTG CTACCGCCCT GGCAGTGGGC GCCCCCGCAT CGGCAGTGTC ATTACGGCAC
ATCCACGCAC TAGATCACCT CATCACCCAG TGGCACGGGC AAGGGCCAAC GTACTTGCCT
GGGGCCATCT CAGTGAGACG GCAAAGTGGC ACCCTCGTCT TTGAACCGCC TACTGTATGA
 
Protein sequence
MAYLPPALAQ ARTALTSMMA DAPPGTRVAV ACSGGADSLA VAATLAHVGP RRGWQISAFI 
VDHDLHPDSA QVSVVAARQL IDLGFPHVTI TRVTVAHGPG HGGPEAAART ARYAALDRLR
TQHGVDVILL GHTRDDQAES VLLGLARGSG ARSLSGIRPR TGHYVRPFLS LTRAATEEIC
SLHEVNVWHD PTNTDITPQG PLRSQVRGVV IPLMENVLGP GVADALARTA DLLHADAEAL
EQWARTAQAD VTITTTNTAE GQVHLDLTAL AALPTAIRHR VLRATALAVG APASAVSLRH
IHALDHLITQ WHGQGPTYLP GAISVRRQSG TLVFEPPTV