Gene Jden_2087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_2087 
Symbol 
ID8381246 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp2278788 
End bp2280062 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content61% 
IMG OID645004840 
ProductUDP-N-acetylglucosamine 
Protein accessionYP_003162028 
Protein GI256833301 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID[TIGR03449] UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGTCT CTCACCCGGC GCACCGCGTC GCGATGCTCT GTGTGCACAC GTCGCCGCTG 
GCCCAGCCAG GGACCGGCGA TGCTGGTGGC ATGAATGTGT ATGTTGTTGA GCTTGCACGT
GCTATGGCGG CTCAGGGCAC AGAGGTGGAG ATTTTCACCC GTCGGACTAC AGCGAATCAG
CCTGACGTTG TGGAAGTGGA TGACGGTGTT CTGGTTCGTC ATGTGACTGC CGGACCGTAT
GAAGGGCTTG ATAAGAACGA CTTACCGGGT CAGTTATGCT ATTTCACGCA AGGGGTGCTT
CGCACAGAAG CTGCCCGACA ACCTGGGTGG TATGACATCG TTCATTCCCA CTATTGGTTG
TCGGGGCAGG CAGGATGGTT GGCTGCAGAC AGGTGGAACG TTCCACTTGT GCACACAATG
CACACGATGG CGCGGGTCAA GAACGCGCAA CTCGCCCCGG GGGACGCCCC CGAACCTCGT
GCACGCATCA TCGGTGAGGA ACAGGTGGTG GAGCAGTCAG CGGCGCTTGT CGCTAATACG
GACAAAGAGG CACACGAGTT ACACACGTTG TATGCAGCTG ATCCTGAAAA AGTTCACGTG
GTCGCGCCCG GAGTGGACCT TGCTGCGTTC ACTCCGCCTA TCGATGACCA CCAGCGGCAG
GCGGAGAGAG TCGCGTTGGG GCTTGCCCCC GAGGGCGATG TCATCGTGTT CGCGGGACGT
ATCCAGCCGC TCAAGGGTCC TGATGTGTTG GTCGACGCGT TGGCGCTTCT TCGTTCTCAA
CAGCCTGACC GCCCCATGCC GACCCTCGTC ATCATTGGGG GCCCCTCAGG TCGTCCTGCT
GCGCTAGGAG AACTGCGGGC TCGAGTCTTT CAGCGGGGGG TTGCGCAACA CGTGCGTTTT
GTTCCTCCTG CCGACCGCCC GACGTTGGCG CAGTGGATGC GGGTGGCTGA CTATGTGGCG
ATGCCGTCTC GCAATGAAAG TTTTGGGCTT GTCGCCATTG AGGCACAGGC GTGTGGGACT
CCGGTGATTG CCGCCGATGT GGGCGGGCTC ACCACCGCGG TTGCCCACAA AAAGTCAGGC
CTCCTCGTGC CCGATCATCG CCCGCAAACG TGGGCAGGGG TGCTCCAGGT GGCATTGGGC
GACACGCAAT TACGTGAGTC GCTTCGCGCT GGTGCGCGTC GGCATGCACA ACAGTTCACC
TGGGATCATA CGGCAACCGA TATGCTCGCA GTGTACGAAC GAACGCGGGT CGCTGCCTCG
GTGAACACTG GATGA
 
Protein sequence
MTVSHPAHRV AMLCVHTSPL AQPGTGDAGG MNVYVVELAR AMAAQGTEVE IFTRRTTANQ 
PDVVEVDDGV LVRHVTAGPY EGLDKNDLPG QLCYFTQGVL RTEAARQPGW YDIVHSHYWL
SGQAGWLAAD RWNVPLVHTM HTMARVKNAQ LAPGDAPEPR ARIIGEEQVV EQSAALVANT
DKEAHELHTL YAADPEKVHV VAPGVDLAAF TPPIDDHQRQ AERVALGLAP EGDVIVFAGR
IQPLKGPDVL VDALALLRSQ QPDRPMPTLV IIGGPSGRPA ALGELRARVF QRGVAQHVRF
VPPADRPTLA QWMRVADYVA MPSRNESFGL VAIEAQACGT PVIAADVGGL TTAVAHKKSG
LLVPDHRPQT WAGVLQVALG DTQLRESLRA GARRHAQQFT WDHTATDMLA VYERTRVAAS
VNTG