| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_2056 |
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| Symbol | |
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| ID | 8381215 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 2244846 |
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| End bp | 2245328 |
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| Gene Length | 483 bp |
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| Protein Length | 160 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 645004808 |
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| Product | transcriptional activator ligand binding domain protein |
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| Protein accession | YP_003161997 |
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| Protein GI | 256833270 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG4978] Transcriptional regulator, effector-binding domain/component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0611899 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTTTTC GAGTGGGCAA CGCGTTCTCG GACCCGCGTG TGACGATGCG CCAACCGCAA
CCGGTTGTTC TCATCCGTGG CACGTTGAAT CCAGCCCATG TGTCAGCGTT TTATGCCACG
GCTTTTCCGG AGCTAGCGTC GTGGTTGAAT CTCAATAGGA TCCCGGTTAG TGGCCCTCCA
GTGACGTTGT CCCACATCGC ATCGTCCACC ATGATGGAGG TTGCTGCGGC TTACCCGGTC
ACGGTGAAGG TTCCCACAAC ACAACGCATC ACCATGGGGA CGCTGCCCGG TGGGCCAGTT
GCCTCACTCA TTGTGCAGGG GAGCCACGAA TACTTAGCTG ATGGCTATGA CCATTTGCGT
GCGTGGTTAG GTGAAAACGG CTATGGTCCG GGTCCTGTGT CCTGGGCCAG TTACATTCGG
CTGCCAGATG AACACGGCGA TCAGCGTGCG TGTGTCACAG AACTCTCCTG GCCGATCGCC
TAA
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| Protein sequence | MSFRVGNAFS DPRVTMRQPQ PVVLIRGTLN PAHVSAFYAT AFPELASWLN LNRIPVSGPP
VTLSHIASST MMEVAAAYPV TVKVPTTQRI TMGTLPGGPV ASLIVQGSHE YLADGYDHLR
AWLGENGYGP GPVSWASYIR LPDEHGDQRA CVTELSWPIA
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