Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_2055 |
Symbol | |
ID | 8381214 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | - |
Start bp | 2243028 |
End bp | 2244659 |
Gene Length | 1632 bp |
Protein Length | 543 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 645004807 |
Product | chaperonin GroEL |
Protein accession | YP_003161996 |
Protein GI | 256833269 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
TIGRFAM ID | [TIGR02348] chaperonin GroL |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00350508 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAAGC TCATTGCATT CAATGAGGAA GCCCGGCGCG GTATGGAGCG CGGGCTCAAC ATCCTCGCCG ACACCGTCAA GGTCACCCTC GGTCCCAAGG GCCGTAACGT TGTGCTCGAC AAGAAGTGGG GCGCCCCAAC GATCACTAAC GATGGTGTGT CCATCGCTAA GGAGATCGAA CTCGAAGAGC CTTACGAGAA AATTGGTGCA GAACTCGTCA AAGAGGTCGC CAAGAAGACT GATGACGTCG CCGGTGACGG AACAACCACC GCGACTGTCC TCGCTCAGGC GCTTGTGCGT GAAGGGCTGC GCAACGTCGC TGCCGGTTCG AACCCCATTG CTTTGAAGCG TGGAATCGAA AAGGCTGTTA ACGCAGTCAC TGAGGAACTC CTCACTGCCG CGAAAGACAT CGAAACCAAA GAAGAGATCG CTGCAACAGC TGCTATCTCT GCTGGTGACC CAGCAATTGG TGAACTGATC GCTGAAGCCC TCGACAAGGT TGGTAAAGAA GGCGTCATCA CCGTTGAAGA GTCCAACACT TTTGGTCTCG AACTGGAACT GACCGAAGGT ATGCGGTTTG ACAAGGGATT CCTTGCCCGC TACTTCGAGA CAGACCCAGA GCGTCAGGAA GCAGTCCTCG AAGACCCATA CATCCTTCTC GTTGAATCCA AGATCTCCAA CGTTAAGGAC CTGCTGCCAC TTCTTGACCA GATCATGAAG CAAGGCCGTT CCTTGCTCAT CATCGCTGAA GACGTCGAAG GTGAAGCACT TGCCACCCTC GTGTTGAACA AGATCCGTGG CACCTTCAAG TCCGTTGCTG TCAAGGCACC TGGCTTCGGT GACCGCCGCA AGGCGATCTT GCAGGACATC GCGATTCTTA CCGGTGGACA GGTCATCTCC GAAACTGTGG GCCTCAAGCT CGAAACTGCG ACCTTGGACC TTCTTGGTCA GGCACGCAAG GTTGTTGTCA CCAAGGACGA GACCACCATC GTTGAAGGTT CAGGCGACCA AGACCAGATC GCTGGTCGCG TCAAGCAGAT CCGCGCGGAA ATCGACAAGT CTGACTCCGA CTACGACCGT GAAAAGCTTC AGGAGCGTCT CGCGAAGCTC GCCGGTGGTG TCGCTGTCAT CAAGGCTGGC GCCGCAACTG AGGTTGAGTT GAAGGAACGT AAGCACCGCA TCGAAGATGC TGTGCGTAAC GCAAAGGCCG CTGTCGAAGA AGGCATTGTT GCCGGTGGTG GTGTTGCACT GATCCAGGCT GGTAAAGCCG CATTCGACAA GGACGCACTG TCCTCGCTCG AAGGGGACGA AGCAACCGGT GCAGCAATTG TGCGCTCCGC AATCGACGCC CCACTGAAGC AGATCGCGAT CAACGCTGGT CTTGAGGGTG GAGTTGTTGC TGAGAAGGTC CGCAACCTTC CTGCCGGCCA GGGACTTAAC GCCGCAACTG GCGTATACGA GGACCTGCTC GCTGCTGGTG TCAACGACCC AGTGAAGGTC ACCCGGTCCG CGCTGCAGAA CGCTGCATCG ATCGCTGCAC TGTTCCTCAC CACTGAGGCA GTCGTTGCAG ACAAGCCTGA GAAGGCTCCT GCAATGCCAG AAGGTGCTGG CATGGGCGAC ATGGGCTTCT AA
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Protein sequence | MAKLIAFNEE ARRGMERGLN ILADTVKVTL GPKGRNVVLD KKWGAPTITN DGVSIAKEIE LEEPYEKIGA ELVKEVAKKT DDVAGDGTTT ATVLAQALVR EGLRNVAAGS NPIALKRGIE KAVNAVTEEL LTAAKDIETK EEIAATAAIS AGDPAIGELI AEALDKVGKE GVITVEESNT FGLELELTEG MRFDKGFLAR YFETDPERQE AVLEDPYILL VESKISNVKD LLPLLDQIMK QGRSLLIIAE DVEGEALATL VLNKIRGTFK SVAVKAPGFG DRRKAILQDI AILTGGQVIS ETVGLKLETA TLDLLGQARK VVVTKDETTI VEGSGDQDQI AGRVKQIRAE IDKSDSDYDR EKLQERLAKL AGGVAVIKAG AATEVELKER KHRIEDAVRN AKAAVEEGIV AGGGVALIQA GKAAFDKDAL SSLEGDEATG AAIVRSAIDA PLKQIAINAG LEGGVVAEKV RNLPAGQGLN AATGVYEDLL AAGVNDPVKV TRSALQNAAS IAALFLTTEA VVADKPEKAP AMPEGAGMGD MGF
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