| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_2039 |
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| Symbol | |
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| ID | 8381198 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 2226154 |
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| End bp | 2227200 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 645004791 |
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| Product | RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily |
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| Protein accession | YP_003161980 |
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| Protein GI | 256833253 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02479] RNA polymerase sigma factor, FliA/WhiG family
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAATCA CAGTAATAAT TGCTTTGGTC AAGAAACCGC GAGATTCCGG GGATGGGGAC
CTCTCCCCAT CGCTTATTCG AATCACCTGT GCACCCCGAG TTGGTGTGAA GGTCTTGGAA
ATGTGTCCTC AAGCCTCCAG ACTGAAACGC ATGAGCACCA TGACAGACAC CCAAGAGCGC
CTCGTGACCG AGAACTTGCA TCTTGTTGGC TACCACGTCA ACGATATGCT CGTGCGCCTG
CCCAGCCACG TCACACGTGA CGAACTGTCC TCAGCCGGAC AATTCGCTCT CGTGCAAGCA
GCCCGCAACT TCGACCCCTC AAGCGGGGTC CCGTTCGCGC GGTTCGCAGC GATCCGAATC
AAGGGCGCCC TCGTCGATGA ACTGCGATCC ATGGATTGGG TATCACGCGG AGTTCGCAAA
AAAATCCGCG ACCTCAACCA GGTGTCTGAC ACACTGACCG CAACCCTTGG CCGAACCCCC
ACCCGCCAAG AGCTTGCTAC CGCACTCGGT GTCCCCCTCA GCGACATTGA CGATGCTCGC
GACCAGGCAG CCACGAAGGT GCTCAGCTTC GAAGGGTACG ACGGTGCGCT CGCCGAGGTT
CTCCCCACCC GTGAGGTTGG TCCAGAAGCG GCGCTCATCG CTTCCGAACA AATCGTCTAC
CTCAAGTCAG CTGTCTCTGC TCTCCCCGAA CGCCTCCGCG CCATTGTGGA GCAAATTTTC
TTCGAGGAAA AGTCTGTCAC AGAGATCGCC GAATCCTTGG GTGTCACGCA GTCACGTGTC
TCACAGCTGC GTGCTGAAGC CATGGTGCTT CTGCGCGACG GGATGAACGC ACACCTGAAC
CCCGACCGTG TGCCAACCCC AGAACGTGAA GGTGGTGTTG TCCACCGCCG CCGCGAAAAG
TACTTCGCTG AGATCGGTGA ACGAGTCCAA GCAACAATTA CCGCATCAAA GGTGGCACAG
TCTGTGCGCG CCGCCGAGGC AGCTGTCGTG GACGCGCTCA ACGGCGGCAC TCCACACGCA
GAGCCAACGT TCGCCACCAC AGCGTAA
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| Protein sequence | MQITVIIALV KKPRDSGDGD LSPSLIRITC APRVGVKVLE MCPQASRLKR MSTMTDTQER
LVTENLHLVG YHVNDMLVRL PSHVTRDELS SAGQFALVQA ARNFDPSSGV PFARFAAIRI
KGALVDELRS MDWVSRGVRK KIRDLNQVSD TLTATLGRTP TRQELATALG VPLSDIDDAR
DQAATKVLSF EGYDGALAEV LPTREVGPEA ALIASEQIVY LKSAVSALPE RLRAIVEQIF
FEEKSVTEIA ESLGVTQSRV SQLRAEAMVL LRDGMNAHLN PDRVPTPERE GGVVHRRREK
YFAEIGERVQ ATITASKVAQ SVRAAEAAVV DALNGGTPHA EPTFATTA
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