Gene Jden_2021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_2021 
Symbol 
ID8381180 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp2211171 
End bp2212550 
Gene Length1380 bp 
Protein Length459 aa 
Translation table11 
GC content65% 
IMG OID645004773 
Producthypothetical protein 
Protein accessionYP_003161962 
Protein GI256833235 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.674854 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGTGA CTGTGCTGGC GTCAGCGCCA CCTGCACCAC AGCGTGCCCC CGGGTCGGGA 
GGCGGCCAGG CAAGTGGTTC AACGGGTGGA TTTGATGAAG CGTTGTCTGC TGCAACCGAG
GCAAACCGTC CCGCTCGTCC ATCTGACGAG GCGCGTCCCA GTGGGACCAA TCGCGCTGAG
CAGGCAGGCG ACACAAGCAC CACCACACCA GCCCGTGACC ACGGGCAACC AGTCGACCAG
GTCCCAGGAG ACGCAACTGA CATCCCCCAA GAAGTTGACG GGATGCAACG ACCTGCCGAT
GTGACCCCTC CGATACCAGT GGACCCTACC CCGGAGGCCT CTGACACCAT TGAGGGTGAG
AAACCCACTG GTGCTCCTGG TGACCAGTGG GCAGAGAGCA GCATGGTCCC CGGCACAATC
GACACCGCCG AACATGCTCC CATGCCAGGG ACGTCCGGCG CCCCAAACGA GAATGCACAC
GCACCAGGTG TGGGCGGCAA AGAAACACAG CCTGTCACCA CCCTCACAGC GCAAGCAGTC
ACCACAGCGG CCTCGCCCAC GGCTGCCCCT AGCGCATCGG CCAACCCTGA CCAGACTGCA
CAGGCCATCA CAGCGACTGC GGTCACCGCG GCTCCCGCGA CACCCAATGC CCCAGCGGGC
ACCCCAACTG GTGAGGGCCG CCCCGAGGTC ACCACCACAA AAGCCGGCGC GCCACAAAGC
GGCCACGGGA CACAAGCCCC CAACCCGGCA GAAGCGCTCG CATCACCACC ACAATCCTTG
CGCATCGTTC GAGACGGACA AACAGCTGGT GCGAACACAG TTGGGATACC CGGAACTGAC
GCAGTGACCA CAACAACCCC CCGGAACGAC GCCACACCCA CCGCGCTTCC CGCAACACCC
CAGGTCACCA CCCCCACAGC TCCCGCTCCA TCACTACCCG CCGCAGCACC CACCAGTGAC
GTTGGCCAAC AACTTGTGGA CCAGCTCCGC GGCCCACTGA TCCACCTGAA ACAAGCCGCA
CCAGGAGAAC ACAGCTTCTC TGTGCGCGTC ACCCCCGAGA ACCTTGGCCC AGTCTCCATC
CGGGCCATTG TCAGCGGGGA CACCGTCCGG ATTGAAATCA CCTGCGTCAA CGACACAGCG
CGAGATGCGA TCCGGCCACT GATGAACGAC TTGAAGAGGG ACCTTCAAGG CGCTGGTCTC
AGCACCGACC TCAACCTCGG ACATGGACGT CAGAGCGGTC ACAGCGACAC CGGCCACACA
CCCACAGGAC CCTGGCGTGG CACCACCACA CCACGCGGAC CTGGCGTGGC CACACCCGAC
CCCCTGCCCG CCCCCACACC TGACACCACT GCCACAACCG GCGTGGACGT CATCGCGTAA
 
Protein sequence
MSVTVLASAP PAPQRAPGSG GGQASGSTGG FDEALSAATE ANRPARPSDE ARPSGTNRAE 
QAGDTSTTTP ARDHGQPVDQ VPGDATDIPQ EVDGMQRPAD VTPPIPVDPT PEASDTIEGE
KPTGAPGDQW AESSMVPGTI DTAEHAPMPG TSGAPNENAH APGVGGKETQ PVTTLTAQAV
TTAASPTAAP SASANPDQTA QAITATAVTA APATPNAPAG TPTGEGRPEV TTTKAGAPQS
GHGTQAPNPA EALASPPQSL RIVRDGQTAG ANTVGIPGTD AVTTTTPRND ATPTALPATP
QVTTPTAPAP SLPAAAPTSD VGQQLVDQLR GPLIHLKQAA PGEHSFSVRV TPENLGPVSI
RAIVSGDTVR IEITCVNDTA RDAIRPLMND LKRDLQGAGL STDLNLGHGR QSGHSDTGHT
PTGPWRGTTT PRGPGVATPD PLPAPTPDTT ATTGVDVIA