Gene Jden_2000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_2000 
Symbol 
ID8381159 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp2192280 
End bp2192663 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content58% 
IMG OID645004752 
Productresponse regulator receiver protein 
Protein accessionYP_003161941 
Protein GI256833214 
COG category[T] Signal transduction mechanisms 
COG ID[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCAC TTGTGATCGA CGACTCCCGT ACGATGCGGC GCATTGTGTC TGGGGTCCTG 
AAGAACCTCG GGTTCGAAAC CCTGGAGGCC GGTGACGGGC AGGAAGCGCT TGAGGTGATG
GAGTCCGAAT CTGACATTAC CCTGTGCTGC ATCGACTGGA ACATGCCGGT CATGGATGGT
CTGACCTACG TGAAGGAAGT GCGAGCCCGC GCCGAGTGGC GTGACGTCAC CCTCATGATG
ATCACCACGG AGTCTGAACA CGGACAAATT GTTCGGGCAC TTGCTGCCGG CGCTCACGAA
TACCTCATCA AACCCTTTAC CCCTGAGGCG ATCGTGCAGA AGCTCGATTT CCTTGGTGTC
CTGCCCGCAA AGGAGCCAGC ATGA
 
Protein sequence
MKALVIDDSR TMRRIVSGVL KNLGFETLEA GDGQEALEVM ESESDITLCC IDWNMPVMDG 
LTYVKEVRAR AEWRDVTLMM ITTESEHGQI VRALAAGAHE YLIKPFTPEA IVQKLDFLGV
LPAKEPA