| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1989 |
|---|
| Symbol | |
|---|
| ID | 8381148 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | - |
|---|
| Start bp | 2182380 |
|---|
| End bp | 2183084 |
|---|
| Gene Length | 705 bp |
|---|
| Protein Length | 234 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 645004741 |
|---|
| Product | iron (metal) dependent repressor, DtxR family |
|---|
| Protein accession | YP_003161930 |
|---|
| Protein GI | 256833203 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1321] Mn-dependent transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGATC TCATTGACAC CACGGAAATG TACCTGCGGA CGATTTATGA GTTGGCGGAG
GAGGGGATTG TCCCCTTGCG GGCGCGGATT GCTGAGCGCT TAGGCCACTC AGGTCCAACC
GTGTCCCAAA CGGTTGCTCG GATGGAACGT GATGGGTTGT TGTATGTCTC TGGTGACCGC
CATCTAGAAC TCACCGACTT AGGGCAGGCC AAAGCAACTC GTGTGATGCG TAAGCACCGG
CTTGCGGAGC GTCTACTCAC CGATGTTATT GGGCTGGAGT GGGAGTTCGT TCACGACGAG
GCGTGCCGGT GGGAGCATGT CATGTCAGAA CGCGTTGAAG AGCGGCTGGT GCAGTTGTTG
AACTCACCAC GGTATTCCCC ATACGGCAAC CCCATTCCTG GTCTGGCTGA GATTGGTGTG
GGTGATGAGC CGGAAGCGTT CCTTGATGGC GTGGTGTCGC TGACGGATCG GGTCATGCGG
GAACCAGCGG CCGGTCAGGT GGTGACCATT GTGCGGTTGG GTGAGCCTGT TCAGACCGAT
AGTGATTTAT TGGGGCGGCT TCACGATGCG GGGGTCACCC CTGGTGCGCA GGTCACGCTC
ACTGCTTCAG ATTATGGGGT GGTGGCGGTG CAGGGGATTG GTGCGCCGAT CCTGCTAGAT
ATTCCTCAGG ATGTCGCACG TCACATTTTT GTGGCTGTCG CGTGA
|
|---|
| Protein sequence | MSDLIDTTEM YLRTIYELAE EGIVPLRARI AERLGHSGPT VSQTVARMER DGLLYVSGDR
HLELTDLGQA KATRVMRKHR LAERLLTDVI GLEWEFVHDE ACRWEHVMSE RVEERLVQLL
NSPRYSPYGN PIPGLAEIGV GDEPEAFLDG VVSLTDRVMR EPAAGQVVTI VRLGEPVQTD
SDLLGRLHDA GVTPGAQVTL TASDYGVVAV QGIGAPILLD IPQDVARHIF VAVA
|
|---|
| |