Gene Jden_1987 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_1987 
Symbol 
ID8381146 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp2181204 
End bp2182019 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content60% 
IMG OID645004739 
ProductNLP/P60 protein 
Protein accessionYP_003161928 
Protein GI256833201 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTAACG CTGTTTACCG GGCGCGACAC CGCCACGAGC GCAATGCTCT CGCGCCACTT 
GCTGCACTTG CCACAAGTGC AGGCCAGAAC GTTGCCAACT ACGGGCGACG CTCAGCCATT
GTGGCGATTT CTTCAGGTCT TGTTGTAGGT CTGGGAACAG TGGCCACCCC GGCAACTGCT
GCACCTCTTG AGGCGCAGAA CATTGCGGGC ACCATTGACA TCTCCTCGTT GACCTCTCAG
GCCCAAGCCG CTGTGGGGGC TGCCCCAACC GTTACCGTTG ACGTTGACGC GAAATGGTCT
GTGGAAAAAT CCAAGATCAA GGTCACCCCG GCGCCAGAGC CAGAGCCAGA GCCAGTCCGT
GAGGTCACTC AGGCCGCATC ACGCACCAAC GAGCGCGCTG AACTCACCAG CAGCACTGCA
TCGACGTCAA CTGCTTCCAC CACACAGCAG ACCACCACCA AGGCAGCTGT CCCTCAGTCA
GTGAACGGGA ACGCAGTCCT TGAGATTGCG TCCCGCTACG TCGGAGTTCC CTACGTCTCC
GGTGGCTCAA CGCCTGCTGG TTTTGACTGC TCGGGGTTCA CCTCCTACGT CTACGCACAG
CTCGGGATCT CCCTGCCACG CACCTCATCC CAGCAACGCT ACGCCGGCAC CGTGGTGTCC
CGCGCAGAAG CAAAACCAGG CGACCTCCTG TGGAGCCCGG GACACATCTC CATTTACGCC
GGTGGCAACA TGCAAATCGA CGCACCACAA CCAGGCAAGA CAATCCAGTT CCGCCAAATC
TGGCAGTCAA ACCCTGTGTT CATTCGCGTT TCCTGA
 
Protein sequence
MTNAVYRARH RHERNALAPL AALATSAGQN VANYGRRSAI VAISSGLVVG LGTVATPATA 
APLEAQNIAG TIDISSLTSQ AQAAVGAAPT VTVDVDAKWS VEKSKIKVTP APEPEPEPVR
EVTQAASRTN ERAELTSSTA STSTASTTQQ TTTKAAVPQS VNGNAVLEIA SRYVGVPYVS
GGSTPAGFDC SGFTSYVYAQ LGISLPRTSS QQRYAGTVVS RAEAKPGDLL WSPGHISIYA
GGNMQIDAPQ PGKTIQFRQI WQSNPVFIRV S