| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1974 |
|---|
| Symbol | |
|---|
| ID | 8381134 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | - |
|---|
| Start bp | 2166431 |
|---|
| End bp | 2170930 |
|---|
| Gene Length | 4500 bp |
|---|
| Protein Length | 1499 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 645004726 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003161916 |
|---|
| Protein GI | 256833189 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTAGCG AACACCGTGA TGCTCAGTCA TCGTCGTCAC CTGCACCCCA CACTGATGGT
GGGAACGCAC TAGACACGCA CGAGCATGCC CCGGTGGAGG AAACCCCGTC GAGTGCTGGT
GCCGGGTCTG CACCGGATTC AGGTCGTCCG CGGTTGGTGA AACCACCGTC AGCTGACGAG
CTTGTTCAGG ACGCACTGAT TGGGTGGCGG CACACCCTCG TGGAGTTGGC TGGCGGTTCC
TCGCTAGCGG ACATTTCGTT GCTTGGCGAC GCGCTTGTTG AGTTAACGTC CGCGCATCCC
TCAGGTATTG CCCAACTTTT CGCGGGTCGG CCAACCCGAC TGACCAATAT TTTCCGGGAC
CGCGATTCGC TACCGGTTGC GCGCAAACGT ACTCGGGCTG TTGCGCAACG GGCGCAGGAA
CAGTCGGAAC GTTTTGGTAT TTCGCCGACG TATTTGGCTA TTGGTGTGGC CACGTGGACG
GAAGTGTCAG ATGGTGAGGG CGACAACGAT GTGGCGGCGT TGGCCCGCGT GGTGACTCAT
CACGGTGCGT CCCCACCGAA GCCGTCGGGT CCGACACGGA TTTTCGCTCC CGTGTTGCTG
CGGCCTATTA CGATCACGAC TCGGCAGCAA GATGATTTTG AGTTGTCGTT GGAGCCGTCC
GCTGAGGTAA ACCCTGTGTT GGCGCGGGCG TTGCGGTCGC GCGGGGCGCT GTTGGATCCG
GTGGCGCTTG CGCGTGGCGC GTTTACTCCT GCCGGGTTTG ATCCGTCTAC GGCGTTGGAT
CGGATTAATT CGTTGGGTGA GGCTGTTCTG CCTGATTTCA CCATGACGGA CAAACTACTG
GTGGGCACGT TTGTACACCC TGGCCAGGTT CTGGTCGATG ATTTGGATGA TTTGGCTGTG
GGGTTGGAAC GCCACGAGGT GGTGGCGGCT CTCGCCGGGG ATGAGAAAAC CCGTGAGGCG
TTGCAGGTGC ATGTTCCGGC TCCTCGCCAC GGTGATATTG ACCCGAATTT AGAGCGTGGG
GTTGGTGATT TAGACCCGCA GGCGCGTGGC GCGTTGGACG CCTTAGCGAC CGGTGCGCAC
ATGTTTATTG ATGCTCCCAT TGGGGCGGAT ACTGCAGGGG TCGCGGCGGC AATTGTGGCT
GAGGCTGCTG CTATTGGACG CAACGTGTTG TATGTACCTG GTCATCGGCG TTCGGCTGAG
GAGTTGACAT CGCGGCTTCG GCAGCTGGGT TTGGATGACA TTGTTCTTGA TGTGGTGCCG
AGCCCGAACT GGCGGTCCTT GGTGTCACGC CGGTTGTTGT CTGCGATGAC GTTGGAAGCG
CCTGCGTTGG ATGTGCAGGC AATCGCGGAT TTGCGGACTC AACTCATTGA CACCCGCGAC
CATCTCACCC GCATGGTTGA GGGGATGCAT TCTCCGCGCC AACCGTGGGG GATTTCTGCG
TATGACGCGT TGCAGGCGTT GGCACGGTTG ACGTCCGAGC GTCCTGCCCC GAGCACGATG
GTGCGGTTTG ATGGCGATAC GTTGGTGCGG GTGGCGTCCG GTTTGCGTGA GTCGATCTCG
GATGATCTGC AGCGCATCGC GGAACTGGGT GGTTTCACGG TGCGCCCAGC CTCGACTCCG
TGGTTTAACG CAACGTTGGC CACAGATGAC GAAGCGCACC TCACGTTGCA CCGCATCAAC
GAGTTGCTGG ACACCGTGTT ACCGCAGGTC ATGGCGCATA TTGAGCGGGT CTCGGAGGAG
ACAGGTTTGT CTGCGCCCAC CACGTTGACG CAGTGGGTGG AACAGCTCGA CATGCTGGAT
GGGATGCGCC AAACCTTGGA TGTGTTCCAG CCCATGGTCT TTGAGCGCAC GGCGGATGAT
TTGGTGGCGG CCACGGCCAC GAAGCAGTGG CGTGCTGAGC ATGGTGTGGA GATGAAGCGG
ATTGCTCGGC GCCGGTTGGT GCGCCGCGCG AAGGACATGG TGCGCCCGGG GGTTCGGGTC
ACTGATCTGC ATGGTTCGTT GGTGCGGATT CAGGCGCAAC GCCAGGTGTG GGCGCAGCAT
TGCCCGGGGG GCGGTTGGCC TCGGTTGCCG CAGGGGCTTA CTGACATTGA GCGCACGTGT
GATGACGCGT TGCAGTTGGT GGATTTGTTG GAGCCTGTGT TGGTGTCGAC CCCGTTGGGT
GGTGGGTTGC GGTCAACCCC GCTTGTCGAT GTGGTTGATC GGTTGCGCCG GTTGCGTGAT
GATTCGGCGT CGCTGGTGGG GTTGCCGGAG CGTGGCGCGT TGATGCGCCG GTTGCAGAAC
ATTGGGTTGG GTGACCTGCT TCTTGATTTT GCTGACCGCC GGGTTGATGC GTCGTTGATG
GATGCGGAAC TTGATTTGGC GTGGTGGGCG TCGGTGTTTG AGCACATCAT TGCGAGTGAC
CCGCATTTGG CGGGGATCGA TGAGAATTCG TTTGAGACGT TTGCGCGCCG GTTCCGTGAC
GTGGATGTGT CGCATGTGGA TTCGTTGTCG TACCCGGTTC GGGTGGCGGC GATTGGTCAG
TTGCGGCGGG CGTTGTCGTC GTACCGTACT CAAAGTGAGG AGTTGTTTGG TCAGCTCATT
GAGGAACGGT TGACCTCGGT TCGTGCCGCG TTTGAAGAGT ATGGCGACAT TATGCGGAAG
CTGCGTCCGT GTGTGATTGC CACCCCAACG ATGATTCCGC ATTTGTTGCC TGCCCACCGC
ACGGTGGATT TGGTGGTGTT GGATTCGGTG CAGCACGTGT CGTTGCCGGC GTTGTTGTCG
GCGATTGGGC GTGGCCGTCA GGTTGTGGTT ATTGGTGATC CGCGGTGCGC GTCGGGTGAT
GGTGTGGACC AGCTTTCCCG TGTGTTGCCG CATGTCTCGT TGTCTGGTGA TGCTGGCCGT
CGTGACCCGG TGTTGACCCG GTTCTTGCAG CGTCACGGGT ATGAGGATGC ACTGGTGCCG
ACCCCGTTGC CGTCGCCTGC TTCGGCGCTG CGGTTTGAGG AGGTTTATGG CACGGGGATG
CCTGACCCGG CTAGTGGCGC GGTGTTGTCG ACTTCGGAGG AGGTCGACAA GGTCGTCGAC
CTTGCTATCG CGCACGCATT GGATCACCCG TCGGAGTCGT TGGCCATTAT TGCTGGTTCT
TCTGTGCATG CGGATCGGAT TCGCGATGCG ATTGTTGCGC AGGTACGGGC AAACCCTGCG
TTGGGTGGGT TCTTTGATCC ACGCCGGTTG GAGCCGGTGG TCATTTCTGA TCTTGAGGGT
GTTGCCGGGT TAACCCGTGA CGCGGTGATC TTCTCCCTGG GATTTGGGCG GACCCCGCAT
GGGCGCACCT TGCACCGGTT TGGTGTGATC TCGGAGCCTC GTGGTCGGGC GTTGCTGTTG
AATGCGTTGG GTGTCTCGCG TCGCCGCTTG ACGATGACTG CGTCGTTTAC TGCCAAGGAT
TTGGATGTTA CTCGTCTTCG TACGGGTGGC GCCCGGTTGT TGGGGGCGTT GCTTGATGTG
ATGACGGGTG GTCCTGGTGA CCCGATCACT GACGACACGA CAGCGCGATC AGGTGCTGAT
GGGGGCGCAT CGGCAGGTCA GGCAGAGGCC AGTGAACACG GTGAGGAAGC CGAGGCGGGA
CACGACGCGT CAGATTCCGC TCAGCTGGAT GTTCCTGGTG ATGAACCGGA CCGACTGTTG
GTGGATTTGG CTGAACGGTT GTGGAAGACC GGTCTCACAG TGGAAACGAA TTATGGGCTC
GAAGGCTCCG ATTACGTACC GCTCGCGGTG GGTCACCCGG ACTTCCCGGA GGAGTTTTTT
GTTGCGGTGG TCATTGATGA CCGCCGGTAT GCTGCGACGC AGTCGATTCG GGTTCGTGAC
CGGTTGCGGT TGGCCCGGTT GCAGCGTTTG GGGTGGCATG TCATCCAGGT GTGGTCGGTG
GCGTTGTTCC TCAACCCGGA GGCGCAAGCT CACCGTATCC GTGAGGCGGT GTTCCGCCTG
GAGGCGGAGC GTCGTTCGCA CACGACCCCG GTGACGGGGG CTCTGCCTGT GACTGTTGAT
GTGACAGCTG AGTTCGCGGA CATGGACGAC TCTGATGTTG TTGATGTTCG TACGGGTGCG
GTTGCTGCGG TGCAGCCGAA GGCCGGTTCT GGTGTGTCTG CGCGTTCTGG TGTGTCGTCG
CAGTCTGCTG GGTCAGCGGT CTCTGCAGCG ACGGGCGATC ACCTTGTTGT TGACGACAAT
GCGGACGTGC CACACGTGCC TAGCCCGGAG CCTGCCCGCC CGGTAGTGTC AGGTTTCTCC
CCACCGGAAC CGGCTGAGCC CACGCTTCCT CGCCCAGATG TTCCCTTCGG TTTGCCGATC
ACGGCTTATG GGGACAACCA ACTGGAGGAT CTGGTCCGGT GGATCGGCTC TGATGGTGTG
CCACGGTCTG ACGATGAACT CGCGGCAGCG GTGCGTAGCG AGCTGGGTGT GACCAGGCGT
TCACACCGTG TGGACACGGT GGTGGCGAAC GCGATTCGAC GGGCTTACGC GCGTGAGTGA
|
|---|
| Protein sequence | MPSEHRDAQS SSSPAPHTDG GNALDTHEHA PVEETPSSAG AGSAPDSGRP RLVKPPSADE
LVQDALIGWR HTLVELAGGS SLADISLLGD ALVELTSAHP SGIAQLFAGR PTRLTNIFRD
RDSLPVARKR TRAVAQRAQE QSERFGISPT YLAIGVATWT EVSDGEGDND VAALARVVTH
HGASPPKPSG PTRIFAPVLL RPITITTRQQ DDFELSLEPS AEVNPVLARA LRSRGALLDP
VALARGAFTP AGFDPSTALD RINSLGEAVL PDFTMTDKLL VGTFVHPGQV LVDDLDDLAV
GLERHEVVAA LAGDEKTREA LQVHVPAPRH GDIDPNLERG VGDLDPQARG ALDALATGAH
MFIDAPIGAD TAGVAAAIVA EAAAIGRNVL YVPGHRRSAE ELTSRLRQLG LDDIVLDVVP
SPNWRSLVSR RLLSAMTLEA PALDVQAIAD LRTQLIDTRD HLTRMVEGMH SPRQPWGISA
YDALQALARL TSERPAPSTM VRFDGDTLVR VASGLRESIS DDLQRIAELG GFTVRPASTP
WFNATLATDD EAHLTLHRIN ELLDTVLPQV MAHIERVSEE TGLSAPTTLT QWVEQLDMLD
GMRQTLDVFQ PMVFERTADD LVAATATKQW RAEHGVEMKR IARRRLVRRA KDMVRPGVRV
TDLHGSLVRI QAQRQVWAQH CPGGGWPRLP QGLTDIERTC DDALQLVDLL EPVLVSTPLG
GGLRSTPLVD VVDRLRRLRD DSASLVGLPE RGALMRRLQN IGLGDLLLDF ADRRVDASLM
DAELDLAWWA SVFEHIIASD PHLAGIDENS FETFARRFRD VDVSHVDSLS YPVRVAAIGQ
LRRALSSYRT QSEELFGQLI EERLTSVRAA FEEYGDIMRK LRPCVIATPT MIPHLLPAHR
TVDLVVLDSV QHVSLPALLS AIGRGRQVVV IGDPRCASGD GVDQLSRVLP HVSLSGDAGR
RDPVLTRFLQ RHGYEDALVP TPLPSPASAL RFEEVYGTGM PDPASGAVLS TSEEVDKVVD
LAIAHALDHP SESLAIIAGS SVHADRIRDA IVAQVRANPA LGGFFDPRRL EPVVISDLEG
VAGLTRDAVI FSLGFGRTPH GRTLHRFGVI SEPRGRALLL NALGVSRRRL TMTASFTAKD
LDVTRLRTGG ARLLGALLDV MTGGPGDPIT DDTTARSGAD GGASAGQAEA SEHGEEAEAG
HDASDSAQLD VPGDEPDRLL VDLAERLWKT GLTVETNYGL EGSDYVPLAV GHPDFPEEFF
VAVVIDDRRY AATQSIRVRD RLRLARLQRL GWHVIQVWSV ALFLNPEAQA HRIREAVFRL
EAERRSHTTP VTGALPVTVD VTAEFADMDD SDVVDVRTGA VAAVQPKAGS GVSARSGVSS
QSAGSAVSAA TGDHLVVDDN ADVPHVPSPE PARPVVSGFS PPEPAEPTLP RPDVPFGLPI
TAYGDNQLED LVRWIGSDGV PRSDDELAAA VRSELGVTRR SHRVDTVVAN AIRRAYARE
|
|---|
| |