| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1963 |
|---|
| Symbol | |
|---|
| ID | 8381123 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | - |
|---|
| Start bp | 2156350 |
|---|
| End bp | 2157186 |
|---|
| Gene Length | 837 bp |
|---|
| Protein Length | 278 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 645004715 |
|---|
| Product | Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase |
|---|
| Protein accession | YP_003161905 |
|---|
| Protein GI | 256833178 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0313] Predicted methyltransferases |
|---|
| TIGRFAM ID | [TIGR00096] probable S-adenosylmethionine-dependent methyltransferase, YraL family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.12808 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCAC GCCTCATTCT CGCAGCCACA CCTATCGGCA ACACCGACGA CGCCTCACCG
CGCCTGCGTG AACTCCTTGC CACCGCACCC GTGATCGCCG CCGAAGACAC CCGAAAACTC
CGTGACCTCA CCACTCGTCT TGGTCTGACC GTCACCGGGA CAGTGGTAGC CCACCACGAA
CACAACGAAA CCCACACCGC CGACCAACTC CTTGACCATG TGGACAGCGG CCTGGACGTT
GTTGTTGTCA CCGACGCCGG AATGCCTGTT GTGTCAGACC CCGGTTATCG CATTGTCGAG
CGGGCCCTGG AACGCGGCAT CGTGGTGACC GCGGTACCTG GACCCTCAGC AGTGGTGACC
GCGCTCGCGG TGGCGGGGCT ACCCACAGAC CGGTTCACCT TTGAGGGGTT TGTGCCGCGA
AAACCTGCGG AGCGCCGGAA AACGTTCGCG GCGCTTGCCG CTGAGCAGCG AACCATGGTG
TTTTTTGAAG CGACTCACCG GGTTGCTGCC TCGCTTGACG ATGCGGCTGC CGCATTTGGC
CCCACGAGGC GGGCGGCGTT GTGCCGGGAG TTGACCAAAA CGTACGAAGA AGTGGTGCGG
GCCCCGTTGG GTGAGTTGGC AAGTCGGGCA GCGCAGGATC GGTTCAAAGG TGAGATTGTC
CTTGTGGTGG CCGGGGCGGA GAAGGGTGGG CAGGTGTCAT TTGACGATGC GTTGGCTGTC
GCCCGGGAGC GGGTGGCTGC TGGTGAACGC ACCAAGGACG CGGCAAGTGC AGTGGCGAAG
GAGACGGGGG TGTCGCGGCG GGAATTGTAT GAGGGATTGA TCGCAGAAAA ATCCTGA
|
|---|
| Protein sequence | MTARLILAAT PIGNTDDASP RLRELLATAP VIAAEDTRKL RDLTTRLGLT VTGTVVAHHE
HNETHTADQL LDHVDSGLDV VVVTDAGMPV VSDPGYRIVE RALERGIVVT AVPGPSAVVT
ALAVAGLPTD RFTFEGFVPR KPAERRKTFA ALAAEQRTMV FFEATHRVAA SLDDAAAAFG
PTRRAALCRE LTKTYEEVVR APLGELASRA AQDRFKGEIV LVVAGAEKGG QVSFDDALAV
ARERVAAGER TKDAASAVAK ETGVSRRELY EGLIAEKS
|
|---|
| |