Gene Jden_1955 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_1955 
Symbol 
ID8381115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp2145609 
End bp2146778 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content58% 
IMG OID645004707 
ProductG5 domain protein 
Protein accessionYP_003161897 
Protein GI256833170 
COG category[S] Function unknown 
COG ID[COG3583] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.586767 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGTCT TACCTGACAA CCGTGTTGTG CGGTTCGTTG CGCGTGCTCT CATCATGGTG 
ATGGTTGCGG TGACAGCCAC CGCGTACACC TACTACCAGC GCCCGTTTGT CTTGGATTAC
AACGGAATGG TGTATGAGGC TGCATTTTTT GGCCGTACTG TTGCCGATGC GCTCGCTGCG
CAGGATCTGA CTGTCACCGA TCAGGATCAC GTGTATCCGG CCCTGGGGGC GCCGGTCGGG
CGCGGTGACC GGGTGGTGGT CCGCACCGCA AAACAGATCC ACCTAGAAAT TGATGGCGAA
CAGCAGGTGC TGACGTCCAC GGCGTTGACT GTGGGTGAGG TACTTGAAGA ACTAGGTGCA
CGTGCGAGTG GCGCTGAAGT GTCGGCGTCT CGTGGGGATT CAGTGGGGCG CGACATTTTG
CGTATTTCCA CTGTCAAAGA CGTGAGTGTC CTCATTGATG GGCAAGAAAT TGACCATGTC
ACGTCACTGG GGACTGTGCG TGACCTGCTC TTGGACATGG GTGTTGTCCT CCAAGAAGGT
GACTCGGTTG ACCCCGGGCT TGACGAGCAC CTGGGTGACG ACATGACGAT CACGATTGCG
CGGGCCTCCA CCGGCGCTGA CACCATCAAA GAGACCCTCA AGTACGACAC CGTGGAGCGG
GAAGATTCTT CAATCCCCAA AGGTGAGAAA GTCGTCGTGC AAAAAGGTCG AGTTGGGGAA
GCTGTCACCA CGTATTCGGT GTCTCTGCTG AATGGTGAAG AGGCAGAGCG CCGAGTCATT
ACCCGCTCTG TTCTTGTGGA ACCGCGCGAC GAAATCATTG CTATTGGCAC AATGGATGTG
TCCAACCCGG CAACCTCAGT GGTCAGCCCA AGCGAAGCAA AAGCGATTGC GAAAGCGATG
GTCGCCGACA AAGGGTGGGA CTCCAGCCAG TGGACCTGCT TGGAAAGCCT GTGGCACAAG
GAAAGTAACT GGCGCGTCAC TGCGGCAAAC CCGTCATCGA GTGCCTACGG TATCCCGCAG
GCATTGCCCG GCTCTAAAAT GGCATCTGCG GGAGCGGACT GGCGCACCAA CGCACGTACC
CAAATAACCT GGGGCTTAGG GTACATTCAG GGTCGTTATG GCACCCCGTG CGGTGCGTGG
TCGCACTCGC AAGCGCGCGG CTGGTATTAA
 
Protein sequence
MRVLPDNRVV RFVARALIMV MVAVTATAYT YYQRPFVLDY NGMVYEAAFF GRTVADALAA 
QDLTVTDQDH VYPALGAPVG RGDRVVVRTA KQIHLEIDGE QQVLTSTALT VGEVLEELGA
RASGAEVSAS RGDSVGRDIL RISTVKDVSV LIDGQEIDHV TSLGTVRDLL LDMGVVLQEG
DSVDPGLDEH LGDDMTITIA RASTGADTIK ETLKYDTVER EDSSIPKGEK VVVQKGRVGE
AVTTYSVSLL NGEEAERRVI TRSVLVEPRD EIIAIGTMDV SNPATSVVSP SEAKAIAKAM
VADKGWDSSQ WTCLESLWHK ESNWRVTAAN PSSSAYGIPQ ALPGSKMASA GADWRTNART
QITWGLGYIQ GRYGTPCGAW SHSQARGWY