| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1952 |
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| Symbol | |
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| ID | 8381811 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 2140668 |
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| End bp | 2142470 |
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| Gene Length | 1803 bp |
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| Protein Length | 600 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 645004704 |
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| Product | dimethyladenosine transferase |
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| Protein accession | YP_003161894 |
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| Protein GI | 256833167 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0030] Dimethyladenosine transferase (rRNA methylation) |
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| TIGRFAM ID | [TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase
[TIGR00755] dimethyladenosine transferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACACTT CACCCAACAC GCTCCTTGGT CCCGCCCACA TTCGGGAACT CGCACAGGAG
TGCGGAGTGA CCCCCACAAA AACCAAAGGA CAAAACTTCC TGCACGACGC CGGCACCGTC
CGCAAAATCG TGCGCCTGTC CGGAGTGGCC CCCACTGACC AAGTCCTCGA AGTGGGACCC
GGACTCGGAT CCCTGACCCT TGGCCTGCTG GACGCCGGAT GTCACGTCAC CGCCATCGAA
CTCGACGACG TCCTCGCCCC CCACCTGGCC GGAACCGTCG AACGATTCCA ACCCGGCGCA
TCGCAACGCC TCACCGTCGT CCACGGCAAC GCACTCGAGG TCACCGAACT ACCCGACCCC
CAACCCACCG CACTCGTCGC GAACCTGCCC TACAACGTGT CCGTGCCCAT CTTGCTCACC
ATCCTCGAAC GATTCCCCAC CATTACCCGT GTCATGGTCA TGGTCCAACG CGAAGTCGCA
GACCGCCTCG TTGCGCCCCC AGGGTCACGC ACCTACGGAA CCCCCTCCGC GAAACTCGCC
TGGTATGGAA CCGCGAACCG TGCCATGAAA GTTGGGCGCA ACGTTTTCTG GCCAGCACCC
AACGTCGACT CCGCACTTGT CTACCTCGAC CGCACCATGC CCGTCACCAC TTCGGCCTCC
CAACGCGACG TCTTCGCTGT CATCGACGCC GCCTTCGCAC AACGCCGCAA AACCCTCCGC
CAAGCACTCG CAGGAATCGC CGGGAACTCA CAACGCGCAT CGACCATCCT TGAGGCAGCG
GGTGTCCCCC CAACAGCACG AGGAGAACAA CTCACCATCC ACGACTTCGC CCGCATCGCC
GAGGCGATGA CACCCAAGGA ACCCGTGTGT CCCTCACCGC GCGAACTTTT TGGTCCCCAC
ACAACCCAGG TAACAGCCCG AGCGCCAGGG AAAGTCAACT TGTCTCTCCG GGTGGGGGCG
GTCCGAGACG ACGGATACCA CCCCCTCATT AACGTCTTCC AGGCCGTGAA CCTCTACGAA
GAAGTCACCG CGACGACAGC ACCAGAGGAC ACCATCCACC TCACCGTGCA CGGACCGGGA
GCCAAATATG TACCCCTGGG GGAAACAAAC CTGGTCACAC GCGCGGCGCG CCTGCTCCAA
CAGCACACGG GGTATGCCGG TGGCGCCCAC ATCACCATCA CCAAAGCAGT GCCTGTGGCC
GGTGGAATGG CGGGTGGCTC CGCTGACGCA GCCGCCACCC TTGTTGCTCT CAACGAACTG
TGGAACCTGT CCCTGTCGAG TGAAGAACTG AGCGTTCTTG GGGCCAAGCT GGGTGCGGAT
GTTCCGTTTG CCCTGCTGGG TGGGACCGCT GTGGGAACAG GGACAGGCAC TGACCTTACC
CCCTTGCCGG GAGCGGGGGA GTGTCATTGG GTGTTCGCGT TGCGCTCTGC CGGGCTTTCC
ACTCCAGCGG TGTTCCAACG GTTTGATACC TTAGCCCCCA GCCCGAGCGA ACTCGACGAT
GCGCATAACA AGGACCTGTA TGAGGCGATC CGGGCCGGTG ATTCGGTGGG CGTGGGAAAG
GCCTTGCACA ATGACCTGCA GGTGGCTGCC CTTGATATGG CTCCCGATCT GCAACTCACC
ATAGATCTCG TGCGCGAGTG TGGCGCCTTG GGGGTGCTGG TGTCCGGATC CGGACCCACT
GTTGCAGCCT TGGCGCGTGA TGCGCAGCAT GCGACAAGTA TCGCTGAGGA ACTGATCGCT
GAAGGTGTGT GTGCCAACGC GTTTACCACC GTAGGGCCGG TGCGAGGTGC GCACACGGTG
TAA
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| Protein sequence | MDTSPNTLLG PAHIRELAQE CGVTPTKTKG QNFLHDAGTV RKIVRLSGVA PTDQVLEVGP
GLGSLTLGLL DAGCHVTAIE LDDVLAPHLA GTVERFQPGA SQRLTVVHGN ALEVTELPDP
QPTALVANLP YNVSVPILLT ILERFPTITR VMVMVQREVA DRLVAPPGSR TYGTPSAKLA
WYGTANRAMK VGRNVFWPAP NVDSALVYLD RTMPVTTSAS QRDVFAVIDA AFAQRRKTLR
QALAGIAGNS QRASTILEAA GVPPTARGEQ LTIHDFARIA EAMTPKEPVC PSPRELFGPH
TTQVTARAPG KVNLSLRVGA VRDDGYHPLI NVFQAVNLYE EVTATTAPED TIHLTVHGPG
AKYVPLGETN LVTRAARLLQ QHTGYAGGAH ITITKAVPVA GGMAGGSADA AATLVALNEL
WNLSLSSEEL SVLGAKLGAD VPFALLGGTA VGTGTGTDLT PLPGAGECHW VFALRSAGLS
TPAVFQRFDT LAPSPSELDD AHNKDLYEAI RAGDSVGVGK ALHNDLQVAA LDMAPDLQLT
IDLVRECGAL GVLVSGSGPT VAALARDAQH ATSIAEELIA EGVCANAFTT VGPVRGAHTV
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