| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1950 |
|---|
| Symbol | |
|---|
| ID | 8381111 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | - |
|---|
| Start bp | 2138555 |
|---|
| End bp | 2140402 |
|---|
| Gene Length | 1848 bp |
|---|
| Protein Length | 615 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 645004703 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_003161893 |
|---|
| Protein GI | 256833166 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.975434 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGATGG CACACTTACT TGGCGCAGAA GCAGTTCACT TAGAGTTCCC CACCAAGGTT
GTTTTTGATT CGGTGACGAT CGGGATCAAT GAGGGGGACC GGATCGGTAT CGTGGGGCGC
AATGGGGATG GAAAGTCCTC GTTGCTGAAG GTTCTCGCGC AACGTCTTGA ACCGGATTCT
GGGCGTGTCA CGTGGCGCAA TGGTGTGCAT GTGGGTGTCC TCGATCAGAC GGACACCTTG
GATCAGGACG ACACTGTGGG GCACGCCATT GTGGGTGACG CGGCTGACCA CGAGTGGGCG
TCTGACCCAA AAATTCGCGA TGTACTAGCC GGGTTGGTCC CGGATCTTGA CTGGGATGCA
CGAGTTGGGG ACCTGTCTGG TGGGCAGCGT CGCCGGGTGG CGTTAGCGAA ACTGCTGGCG
GGTGATTGGG ACGTGCTGGC GCTCGATGAG CCAACGAACC ACCTCGACGT GGAGGGGATC
ACCTGGTTGG CGCAGCACCT GAAGCGCCGA TGGTCGGCGA ATCAGGGTGG GCTGTTTGTG
GTTACCCACG ACCGGTGGTT CCTTGATGAG GTGTGTAACC TCACGTGGGA GGTTCACGAC
CGTATTATTG AACCCTTTGA AGGCGGGTAT GCTGCCTACA TTTTGCAGCG GGTGGAACGT
GACCGGCAGG CGTCGGTTGT GGAGGCGAAA CGCCAGAACC TGATGCGTAA GGAACTCGCC
TGGTTGCGGC GGGGTGCTCC TGCACGGACG TCAAAACCGA AGTTCCGTAT TGATGCGGCC
AACCAGTTGA TTGCCAATGA ACCGCCACCA CGGAACCCAG TGGAGTTGTC GCAAATGGCG
ACAGCGCGTT TGGGTAAGGA CGTGGTTGAT CTGATCGATG CGGGGTTTGC CTATGGTGAC
AACGAGGTTC TTCGTGATGT GACCTGGCGG ATCGCCCCGG GGGAGCGGAC CGGCATCCTT
GGTGTCAACG GTGCCGGGAA ATCGACGTTA CTGAAGCTTG TCACTGGTGA ACTGTCTCCG
ACGTCGGGGC GGGTAAAGCA CGGGAAAACT GTGCAAGTAG CCACTTTGAA TCAAGAACTG
GAAGGGCTGC GGGAAGTTGC GCAGGACCGG GTGTCGGATG TGATTGCCCG CAAGCGCACA
ACCTATGTCA CTGGCGGGAA GGAAATGACG CCAGGGCAGA TGCTCGAACG TCTTGGTTTC
ACGAATACGC AGCTTGCTAC TCCAGTCAAG GATTTGTCGG GTGGGCAGCA ACGGAGGCTG
CAGTTTTTGT TGCTGCTCCT TGATGAACCG AACGTTCTGA TCCTGGATGA GCCAACGAAC
GACCTGGACA CGGACATGCT GGCTGCCATG GAAGATCTGT TGGACACCTG GCCAGGAACG
TTGTTGGTGA TTTCGCACGA CCGGTATTTC TTGGAACGGG TGACCGACCA GCAGTATGCA
GTGTTGAATG GGCAGATGCG GCATCTTCCT GGTGGGGTTG ATGAGTATTT GGCGCTGTCC
GCGCAGGTGT CTGCTCAACG TGTTGGTCGT GGACGTTCTG GTGGCGCATC GTCTGTGGCT
CCCCACGATT CTGGTTCTTC CCGGGCTCAT GGCGTCTCCG ATAACGCAGG GGGTAGCTCA
TCGGGTGTCA GTAGCGCGGA TATTCGGGCT GCGAAAAAGG ATCTTGCCCG TATTGAACGC
CGGTTAGCGA AGATTGAGGA AGCTGAGGCG AAAATTCATG CCGACATGGC CGCTCACGCC
ACGGATTACG AGAAAACGGC GGCATTGGAC GCGCAACTTC GGGATCTGGC GGTCGAGCGT
GACGACTTAG AAATGCAGTG GTTAGAAGCC TCAGAGATTA CGGGCTGA
|
|---|
| Protein sequence | MTMAHLLGAE AVHLEFPTKV VFDSVTIGIN EGDRIGIVGR NGDGKSSLLK VLAQRLEPDS
GRVTWRNGVH VGVLDQTDTL DQDDTVGHAI VGDAADHEWA SDPKIRDVLA GLVPDLDWDA
RVGDLSGGQR RRVALAKLLA GDWDVLALDE PTNHLDVEGI TWLAQHLKRR WSANQGGLFV
VTHDRWFLDE VCNLTWEVHD RIIEPFEGGY AAYILQRVER DRQASVVEAK RQNLMRKELA
WLRRGAPART SKPKFRIDAA NQLIANEPPP RNPVELSQMA TARLGKDVVD LIDAGFAYGD
NEVLRDVTWR IAPGERTGIL GVNGAGKSTL LKLVTGELSP TSGRVKHGKT VQVATLNQEL
EGLREVAQDR VSDVIARKRT TYVTGGKEMT PGQMLERLGF TNTQLATPVK DLSGGQQRRL
QFLLLLLDEP NVLILDEPTN DLDTDMLAAM EDLLDTWPGT LLVISHDRYF LERVTDQQYA
VLNGQMRHLP GGVDEYLALS AQVSAQRVGR GRSGGASSVA PHDSGSSRAH GVSDNAGGSS
SGVSSADIRA AKKDLARIER RLAKIEEAEA KIHADMAAHA TDYEKTAALD AQLRDLAVER
DDLEMQWLEA SEITG
|
|---|
| |