| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1944 |
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| Symbol | |
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| ID | 8381810 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 2132482 |
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| End bp | 2133099 |
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| Gene Length | 618 bp |
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| Protein Length | 205 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 645004697 |
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| Product | transcriptional regulator, TetR family |
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| Protein accession | YP_003161887 |
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| Protein GI | 256833160 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00538978 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGCTC ATGAACGACG TGAACAGCTC GTCGCTGTGT CCCGAACACT CTTTGCAGAA
AAAGGGTTTG AAGGCGCCAG CATTGAAGAG ATCGCAGCAC GCGCTTCAGT CTCAAAACCC
GTGGTCTACG AGCACTTTGG CGGCAAAGAA GGAGTCTACG CGGTTGTTGT GGACCGAGAA
ATTCAAGCCC TCACAGGAGC ACTCACGAGT GCGCTTGATC TGGGTGGCCA CCCAAAAATC
ATCGTGGAAC GCATGACATT TGCTCTGCTT GACTATATTG AGACGAATGA AGCCGGTTTT
CGGGTTCTTG TCCGCGATTC ACCTGTGGCA CAGGCCACGG GGTCGTTCTC GTCACTCATT
GGGGATGTCG CCAGTGAAGT CGAACACCTC CTCGCTGAAC AGTTCCGGCG CCGAGGGCTT
GACCCGCGCA CGGCACCGAT TTACGCACAA ATGCTCGTGG GCATGGTCGC ACTCACCGGG
CAACACTGGC TCGATTCTCG CCAACTCAAA AAAGAGGAAG TTGCCGCACA CCTGGTCAAC
CTTGCCTGGA ATGGGCTCGC TGGTCTGGAA CGAAAACCAC GCCTCGTCGG TGATCACGGT
CCGATACACT CCGCCTAA
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| Protein sequence | MTAHERREQL VAVSRTLFAE KGFEGASIEE IAARASVSKP VVYEHFGGKE GVYAVVVDRE
IQALTGALTS ALDLGGHPKI IVERMTFALL DYIETNEAGF RVLVRDSPVA QATGSFSSLI
GDVASEVEHL LAEQFRRRGL DPRTAPIYAQ MLVGMVALTG QHWLDSRQLK KEEVAAHLVN
LAWNGLAGLE RKPRLVGDHG PIHSA
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