| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1941 |
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| Symbol | |
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| ID | 8381102 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 2128800 |
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| End bp | 2129381 |
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| Gene Length | 582 bp |
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| Protein Length | 193 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 645004693 |
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| Product | ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 |
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| Protein accession | YP_003161884 |
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| Protein GI | 256833157 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1825] Ribosomal protein L25 (general stress protein Ctc) |
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| TIGRFAM ID | [TIGR00731] ribosomal protein L25, Ctc-form |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.583336 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTGACG TGAAACTCGT CGCTTCTGCT CGCACTTCAT TTGGTAAAGG TGCAGCTCGC
CAACTTCGCC GCGATGGCCA CGTGCCCGCA GTCATCTACT CGCACGGTTC CGCCGCAGAG
CACATCTACC TTGACGGTCA CGAAGTGTTC CTCACCGTGA AAAACCACCG CTCGTCACTC
CTCAACATTG ACCTCGATGG TGAGGTGAAG ACCGTCATCA TCAAGGATGT TCAGCGCGAC
CCTATTGGTC GAGTTGTTGA GCACATCGAC TTCCTTGCTG TGAAAAAGGG TGAGAAGTCC
ACCGTTGAGG TTCCTGTTGT TCTCGTGGGC GAAGCTGCTG CTGGCGCCCA GGCAACCCTT
GAGCTCATGA AGGCCACCGT AGAAGCCGAC GTGTCAGTTC TTCCCGAGAA CGTGGAGGTT
TCCGTAGACG GTCTCGAAGC GGGTACCGTT CTTTACGTCA AGGACGTCAC CCTTCCTGAC
GGTCAAGTCT TCATCAACGA AGACGACCAG GTCGTTGCCG TTGTCAACGA AATCCGCACC
GCGGACGAGT CCTCAGACGA CGAGGCAACT GACTCCGAGT AA
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| Protein sequence | MSDVKLVASA RTSFGKGAAR QLRRDGHVPA VIYSHGSAAE HIYLDGHEVF LTVKNHRSSL
LNIDLDGEVK TVIIKDVQRD PIGRVVEHID FLAVKKGEKS TVEVPVVLVG EAAAGAQATL
ELMKATVEAD VSVLPENVEV SVDGLEAGTV LYVKDVTLPD GQVFINEDDQ VVAVVNEIRT
ADESSDDEAT DSE
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