| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1928 |
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| Symbol | |
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| ID | 8381091 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 2111810 |
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| End bp | 2113948 |
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| Gene Length | 2139 bp |
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| Protein Length | 712 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 645004682 |
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| Product | Carbohydrate-binding CenC domain protein |
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| Protein accession | YP_003161873 |
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| Protein GI | 256833146 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3507] Beta-xylosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGACGCT GGCAGAGGAC AACTGCCTTC GGTGCGTTCA TGGCGCTCAT GGTCGGCAGT
CTTGCCGCCA TACCAGCCAC ATCGGCCACA GCAGCAGGCG AAGAAATCAT CGTCAACGGA
GGATTCGAAA ACAACACCAA CGGGTGGGAG ATCCGCAACG GGGGGAATCT CTGGCTCGAC
CCAGACAAGA CCAGTGGAAA CTCCTCCGGT TTCATCACCC ACCGGGAATC CACCCAATCA
GGGCCCTGGC AAAATATCAC CGGGAAAGTC CAAGCAGGCA AGACCTACAC GGTCAGCGCC
CGAGTGAAGT ACAAGTCAGG GCCAGCCACC AAACAGTTCT TCATCACGAA CTTCTACGGT
GGTGGCAGCT ACACAAACCT CGCCGGGGCA ACAATCCCCA AAGACACCTG GGGCACCATC
TCAGGGACCT TCACCATCCC CAGCACGCAA AGCGTCGCAG AAGCGCGGCT CTTCATTGAA
ACACCATGGG TGGCCAACCC TGCCGACGAC CGCGATAACA ATCTCATGAA CTTCCGAGTC
GATGACGTCT CGTTGAAGGA AGTCACCGGT GGGACACCAA CAAACCCCAC CGACCCAGGC
AACCCAGCCA ACCCCATCAT GACCACAAAC CACACGGTTC ACACTGGGGT GCAGGCCAAA
AAGATCGGGG ATGGCAACCC ACTAGTGAGC CACAAGTTCG GTGCAGACCC CTACCACCTT
GTGTACAACG GCCGTGTCTA CATGTACATG ACCAATGACA CCCAAGAATG GGCAGCACGC
AACAACGGGG GCAGCAAGAA CACTTACGCC GCGATCAACA CCCTGTCCGT CATCTCGTCG
TCAGACCTGG TGAACTGGAC AGACCACGGG AACATCGCCG TGGCGGGTCC CAACGGTGCG
GCGAAGTGGG CGAACAACTC ATGGGCACCG GCTGTGGCAG TGAAGAAAAT CAACGGAAAA
GACAAGTTCT TCCTCTACTT TGCCAACAAC GGTTCCAGCG TAGGAGTACT CACAGCAGAC
TCCCCCACCG GTCCGTGGGT TGATCCCATT GGAAAACCCA TCGTCAACGC CCAAACACCG
GGTGCATCAA ATGGCAAAAA CTGGCTGTTC GACCCAGCCG TTCTCGTTGA CGATGATGGG
CAAGGCTACC TCTACTTCGG TGGTGGCGGC GAAGATGGCT CAGGGTCCTC CCAAAACGAG
AACAACCCCA AGTCATCCCG AGTCATCAAA CTCGGTGCCA ACATGATCAG CACGTCAGGG
TCGGCGGCAG TGATCGACGC CCCCGCCATC TTTGAGTCGT CTGGCATCCA CAAACGCAAC
GGCAAGTACT ACTACTCCTA CTCGTCGAAC TTCGGCAACG GAGGCCCAGG ACGTCTTCCC
GGATACCCGG CACACGGGGT CATTGCGTAC ATGATGGCTG ACAACCCCAT GGGGCCATGG
ACTCCAGCAC AGTACAAGGG AACCGTGCTG CCGAACATGT ACCAATTCTT CCAAGTAGGG
GGAAACAACC ACCAATCATT CTTTGAATTC AATGGCAAGT GGTACATCTC CTATCACGCA
GGAACGTTGG ACAAGGCCCT GAACAACAAT GTTGGGGGAA ACACCAAGGG TTACCGCAGC
ACCCACCTGA ATGAAGTCAC GTACAACGCT GACGGCACCA TGCGTGTTGT CAACGCTGAC
TACAAAGGTG TGGCACAAGT GGGACGCCTA CGTCCCTACT CCGTCAATGA AGCCGAAACC
ATCGGTTGGC AAAACGGGGT GACCACCACC AACATCACTG AAGGATCACG CCAGTTCCCT
GGGTCCTCGG TCAACCTGGC AGTCAACAAC ATTCACAACA ACGATTGGAT CGGTGTCGGC
GGAGTTGACT TCGGTTCCAG CGGTGCAGCA AGCATCACCG CGAAGGTCAA ACCACTGACC
AACAACGGAA CCATTGAGGT ACGCCTAGGA TCCCCGGACC GCAATTCCTC ATCATCCCGG
CTCGTCGCCA CGCTCAACGC CAACACCCCG GCGAACCAGT GGCGCGACAT CACCGCTCAA
GTGTCAGGGG CAACAGGAGT ACAGAACGTC TACTTCGTCT TTAGAGGCGG ATCGGGTGCG
CTGATGGAAT TTGACTCCTG GTCATTCACC CAACGCTAA
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| Protein sequence | MRRWQRTTAF GAFMALMVGS LAAIPATSAT AAGEEIIVNG GFENNTNGWE IRNGGNLWLD
PDKTSGNSSG FITHRESTQS GPWQNITGKV QAGKTYTVSA RVKYKSGPAT KQFFITNFYG
GGSYTNLAGA TIPKDTWGTI SGTFTIPSTQ SVAEARLFIE TPWVANPADD RDNNLMNFRV
DDVSLKEVTG GTPTNPTDPG NPANPIMTTN HTVHTGVQAK KIGDGNPLVS HKFGADPYHL
VYNGRVYMYM TNDTQEWAAR NNGGSKNTYA AINTLSVISS SDLVNWTDHG NIAVAGPNGA
AKWANNSWAP AVAVKKINGK DKFFLYFANN GSSVGVLTAD SPTGPWVDPI GKPIVNAQTP
GASNGKNWLF DPAVLVDDDG QGYLYFGGGG EDGSGSSQNE NNPKSSRVIK LGANMISTSG
SAAVIDAPAI FESSGIHKRN GKYYYSYSSN FGNGGPGRLP GYPAHGVIAY MMADNPMGPW
TPAQYKGTVL PNMYQFFQVG GNNHQSFFEF NGKWYISYHA GTLDKALNNN VGGNTKGYRS
THLNEVTYNA DGTMRVVNAD YKGVAQVGRL RPYSVNEAET IGWQNGVTTT NITEGSRQFP
GSSVNLAVNN IHNNDWIGVG GVDFGSSGAA SITAKVKPLT NNGTIEVRLG SPDRNSSSSR
LVATLNANTP ANQWRDITAQ VSGATGVQNV YFVFRGGSGA LMEFDSWSFT QR
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