Gene Jden_1909 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_1909 
Symbol 
ID8381073 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp2089473 
End bp2090480 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content58% 
IMG OID645004663 
Productperiplasmic binding protein 
Protein accessionYP_003161855 
Protein GI256833128 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCACA CCCGCGCCCG TGGCCTTGCG GCCGGAGCAC TCCTCGCAGC GGTCACACTG 
CTCGCTGCTT GTGGCACCAC AGAACCAGCA GCCTCACAAA CAACAGTCAG TGAGGCACCA
GAGTCCTCCA GCGGCCCTCT CACTTTCACC GATGGGCGTG GAGAAGAGGT GACTCTTCCC
GACGGTCCTG CTACCCGCGT GGTTGTTTTG GAATGGTCAC AAGCAGAAGC TGTCGTGTCC
TTGGGAGTTG AGCCTGTTGG GCTTGCAGAT GTTGCTGGTT ACACCAGTTG GGTTGGCACT
GCAGCGCCGC TCACCAATGA ACCCACCGAT GTGGGTGTAC GCCGGGAACC GAGCATTGAA
ACAATCGCAA CCCTCGAACC TGATCTCATC CTGGGATCGG TCGGTTCAAT TCCTGACTCA
GCCATGGAAC AAATGGAGCG CATCGCCCCG ATTGCTTTGA TGACTGGGGC CAATGGGGAT
GACCCACTTG GCTTAATGCG CAGCGAGTTC ACGACGATCG CCACCGCGCT CGGTCAAGAA
GACAACGCCG AGAAAATCCT CGCCACCTAC GACGACACGA TCGCAGCGAA CGCACAAAAA
TTAGCTGATG CTGGTCTCGA GGGGACCCCC ATCGTCTTGT CATCACCCTA CGCAGATGGC
GCAAACGTCA CCATCCGCAT GCATGGGCCG CGCACCACAG TTCAAGCTGT CGCCAACGAC
ATGGGCCTCA CCCCAGCGTG GGAAGACCCA GGTGACGAAC AGTGGGGCCT GTCCAACATT
GACTTGGAAG GTTTAACCAA CCTCCCTGAT AACACCCGAT TCTTTTACTG GGGCAACGAC
ACATCTGAGT CCATTGACGC CCTAGAAAGC GCCGCCCTGT GGCAAGACCT CCCCTTCGTC
AAGGAGGACC ACGTCTACCG AGGTGCTGTC GGCATCTGGG CATATGGCGG GCCAGTGTCG
ATGACTGCGT GGAGCAACGA CATCACCAAC CAGCTCACCG CACCATAA
 
Protein sequence
MIHTRARGLA AGALLAAVTL LAACGTTEPA ASQTTVSEAP ESSSGPLTFT DGRGEEVTLP 
DGPATRVVVL EWSQAEAVVS LGVEPVGLAD VAGYTSWVGT AAPLTNEPTD VGVRREPSIE
TIATLEPDLI LGSVGSIPDS AMEQMERIAP IALMTGANGD DPLGLMRSEF TTIATALGQE
DNAEKILATY DDTIAANAQK LADAGLEGTP IVLSSPYADG ANVTIRMHGP RTTVQAVAND
MGLTPAWEDP GDEQWGLSNI DLEGLTNLPD NTRFFYWGND TSESIDALES AALWQDLPFV
KEDHVYRGAV GIWAYGGPVS MTAWSNDITN QLTAP