Gene Jden_1908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_1908 
Symbol 
ID8381072 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp2088548 
End bp2089432 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content61% 
IMG OID645004662 
ProductABC transporter related 
Protein accessionYP_003161854 
Protein GI256833127 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGGGTGT CTTCCGTGCA TTCGCCTGAA CAGCAACCAT CCCCAGAGAT CACCGGTCTC 
CTGCAGGGAA CCAATCTCAC CATTGCATAC GGCACCCACA CGGTTATTCA TGACGCGTCC
CTTCACCTAC AACCAGGGAC AGTCACCGCT CTCGTTGGAC CCAACGGCTC CGGAAAATCC
ACACTGCTTC GCAGCCTCTC CCGCCTCCAC AGCCCCAATC ACGGCACTAT CACCCTGAAC
AAGACCACCC CCATTAACTC GCTCAGCGCA AAAGAATTTG CTCGTCAGAT CACGCTCCTG
TCACAAGCGC GCCCCACCCC TGCGGGCCTG ACCGTTCACG ACGTTGTGGA ATTTGGGCGC
CACCCACACC GCCACGGCTG GCGCGGAACA GACCCACACG GACCCGATGC AGTGAAACGC
GCACTTGCCC TCACCGGGAT CGCACCACTA GCTCACCACT ACGTGGACAC CCTCTCTGGC
GGTCAACTCC AACGTGTCTG GTTCGCCAGT GCCCTCGCCC AAAACACCTC AATCCTCCTT
CTCGACGAGC CCACCAACCA CCTCGACCTG CGCTACCAGG TCGAGATACT CCAATTAATG
CGCCAACTCG CGGACACCCA CAGCATCACC GTTGGGGTCG TGCTCCACGA CCTCAACCAC
GCCGCAGCGG TCGCTGACAC CGTCCTGGTC TTGGACCAAG GCCAGGTCGT CGCCGAAGGC
CCCCCACACC TTGCCTTCAC CTCGGACCTA CTCACCACCG TGTACGACAT TGACGTTGTT
GTCACCCACA CCACCCCGAC AACGGTCACG GTGAGCACCC CAACAACGTT GACACTGCGA
GCGCAACCAC GCGCTCACAC CAACCAGCCA GCACCCGTGT GCTGA
 
Protein sequence
MGVSSVHSPE QQPSPEITGL LQGTNLTIAY GTHTVIHDAS LHLQPGTVTA LVGPNGSGKS 
TLLRSLSRLH SPNHGTITLN KTTPINSLSA KEFARQITLL SQARPTPAGL TVHDVVEFGR
HPHRHGWRGT DPHGPDAVKR ALALTGIAPL AHHYVDTLSG GQLQRVWFAS ALAQNTSILL
LDEPTNHLDL RYQVEILQLM RQLADTHSIT VGVVLHDLNH AAAVADTVLV LDQGQVVAEG
PPHLAFTSDL LTTVYDIDVV VTHTTPTTVT VSTPTTLTLR AQPRAHTNQP APVC