Gene Jden_1903 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_1903 
Symbol 
ID8381067 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp2081994 
End bp2083880 
Gene Length1887 bp 
Protein Length628 aa 
Translation table11 
GC content58% 
IMG OID645004657 
Producthypothetical protein 
Protein accessionYP_003161849 
Protein GI256833122 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCCTA CACCCTTCAC ACGCGCCATT ATTTTTGCTG GTGTGTTGAG CGCAATCCTG 
GTTGGTTGTT CCGGTGAATC ACCTGAATCA GGTGATTCAC CGGACCAAAC GCAGCAGAGT
TCAACAACCA CCATTGATGC AGCGTCGGTT GATGTGACCC AAACAGTTGA TGAGGTTCTT
GCGGCGAATG ACACCGTTCA CTTAGTCGAT GACGTCGACG TGTCAGCAGG TGTTGACGTC
GACCTTTCCT CGCCGGGGAA AACTGATGGG GTGAGCGTTG ATGGTTCTAC TGTGACCATC
ACTGCTGCAG GGACCTACCG CCTTTCTGGA ACGTTGTCGG GGTCGCTTCA GATTGCTGCC
CCTGACGCTC ACGTCACGCT GATCCTTGAT GGGGTGACGA TCACGTCGAC GAGCGGGCCA
GGGATTGCTG CCACGGATGT GGATGAACTG ACAGTGTTTC TTGCTGAGGG GAGTGTGAAC
ACTGTGAGCG ATGCTGCGGA GTATCCGCAG GACATCGAGG CGAATGCTGC GCTGTTTAGT
GCTGGAGACC TGTCCATTAC TGGTGTGGGG ACGCTCAACG TCCAAGGGGC CTACGAGGAC
GCTATTGCGT CCAAAGATGG ACTAATTATT GATTCTGGCA CCATCTCTGT GACCGCTGCT
GATGACGGGA TTCGTGGGAA GGATTATGTC GTCGTGACCA GCGGGGAGGT GTCAGTGACT
GCTGGTGGAG ATGGGCTGAC TGCGAATAAC GATACAGATG ACACCCGAGG GTTTGTTGTT
GTGAACGGTG GAACGATCAC TGTTGCCGCC CGCGGGGATG GGATTTCGGC GGAGACGGAC
CTCCTTGTCA CGGGGGGACA ACTCACGGTG GAAAGTGGAA CGGGATCAGC GACCGCGCCA
ACAGACGACA TCTCAACCAA AGGTCTTAAA TCTGGTGTGA TGACCATCAT TGCTGCAGGG
GAACTGACAG TCGACGCGCA AGATGATGCA CTTCACAGCA ACGGAGCCAT CGTGCTGACT
GGAGGTGAGA TCCTCCTAGC GAGCGGAGAT GACGCCGTAC ACGCGGATGG GCATCTTCGC
GCATCAGAAG GTACCCTCAC CATCACATCC AGTGTGGAGG GGATTGAGGG CTACCACATT
GCCTTGGAAG GAACGACCAT TGACCTGGTG GCCAGCGATG ACGGGTTGAA TGCCACTGGT
GGGAATGACA TGACCACTGA CGGTCAAGCC CCACCACAGT CGGACGACAC TGAGGGGGTG
CCCCGTGAGC GCCCGAACGA CGGAACACCA CCTGACGGTC GTGACATGCC CCAGCCGCCG
AACACGGACA ACGCCCCTGA TGCGAATAAC ACCCCCGATG CGGACAATGC CCAGCAGCGC
CCGCAAGGTG TCCGCCCACA AGGAGGTGGA ATGGGTATGG AAGCAGCAAC GGACGCCTCC
CTGGCCATCA GCGCTGGCCG TATCACCATC ACAGCCGGGG GCGATGGCAT CGACTCCAAC
GGATCATTCA CCATGACAGG CGGTGAGGTC CGGGTTGATG GGCCAACACG TGGGGGTAAC
GGTTCACTTG ACGTGGCTGG GGAATTTACG CTCACAGGAG GGACACTCCT TGCGTTAGGC
ACGGCGGACA TGCCGGTCAA TCCCAACAAT GCAGAGCAAG CATGGATCCG TGTGGACACC
CTGGGTGCGA GCGAGGGTGA CACCGTGACG GTCACATCGG CACAGGGTGA TGAACTGCTC
ACTACCAGCG TGCGGGACAC CAGTGCGGCA CTGTTCTGGT CTAGCCCACT CCTTGCCGAC
CACTCGGAGG TGACAGTGTC CGTCAATGGC GAAGTCGTGG GCACAGCAAC GGTGAGTACA
GCGGGTACAG GAGCCGCTGA CGGGTAA
 
Protein sequence
MSPTPFTRAI IFAGVLSAIL VGCSGESPES GDSPDQTQQS STTTIDAASV DVTQTVDEVL 
AANDTVHLVD DVDVSAGVDV DLSSPGKTDG VSVDGSTVTI TAAGTYRLSG TLSGSLQIAA
PDAHVTLILD GVTITSTSGP GIAATDVDEL TVFLAEGSVN TVSDAAEYPQ DIEANAALFS
AGDLSITGVG TLNVQGAYED AIASKDGLII DSGTISVTAA DDGIRGKDYV VVTSGEVSVT
AGGDGLTANN DTDDTRGFVV VNGGTITVAA RGDGISAETD LLVTGGQLTV ESGTGSATAP
TDDISTKGLK SGVMTIIAAG ELTVDAQDDA LHSNGAIVLT GGEILLASGD DAVHADGHLR
ASEGTLTITS SVEGIEGYHI ALEGTTIDLV ASDDGLNATG GNDMTTDGQA PPQSDDTEGV
PRERPNDGTP PDGRDMPQPP NTDNAPDANN TPDADNAQQR PQGVRPQGGG MGMEAATDAS
LAISAGRITI TAGGDGIDSN GSFTMTGGEV RVDGPTRGGN GSLDVAGEFT LTGGTLLALG
TADMPVNPNN AEQAWIRVDT LGASEGDTVT VTSAQGDELL TTSVRDTSAA LFWSSPLLAD
HSEVTVSVNG EVVGTATVST AGTGAADG