| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1884 |
|---|
| Symbol | |
|---|
| ID | 8381048 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | + |
|---|
| Start bp | 2063662 |
|---|
| End bp | 2065116 |
|---|
| Gene Length | 1455 bp |
|---|
| Protein Length | 484 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 645004638 |
|---|
| Product | signal transduction histidine kinase |
|---|
| Protein accession | YP_003161830 |
|---|
| Protein GI | 256833103 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3920] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.857043 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCAACTC TCAGCGACCT CGTCGAACGC TACGGCTACC TTGAACCTCA CCAAGTGGAG
TGGCTCCACC TCCTTGTGGG CGATTGGCAA CTCATTTCCG ACTTGGCGTT CGCTGACCTG
GTCCTGTGGC TTCCTACAGA CGACGGCAAT TTTGTTGCCC TCGCCCAGTG CCGCCCATCA
ACAGGGGCTA CAGTCCATTA TGACGATATT GTGGGCACAA TGGCGCCCGA CACGGTGCGT
TCCCAATTAG AGAAAGCACT CGTCGAGGAG TCCATCCAAC GCTCCCGCGA ACCGCGCTGG
TTTGGTACCT ACGCAGTGCG CGAAGAAGCG GTGCCAGTGA ACTGCCACGG CCACACCATT
GCGGTTGTTG CCCGCCAAAC AAACTTAGGT GCAGGTCGTA CACCTTCACG CATGGAAATG
AACTATGTGG AAGCCGCCGA CGACCTCATG ACGATGATTG CGGCATCCGA ATTCCCTCAC
CCCGATGCGG CAACTGGGTC ACGGCGTGGA GCTCCGCGGG TGGGTGACGG GTTGTTGCGG
CTCAATGCTG AGGGGGATGT TCTCTACGCA AGCCCTAACG CGTTATCGTG CTTTCACCGG
CTCGGCGTGC TGGGGCCCCT GGTGGGGCAA TCGTTGGTTG AGGTCACCGC TGACCTCATT
GAACACAAAG TCCCTGTTGA TGAGTCCATG CCATTGGTCA TGATGGGACG CGCCCCGTGG
CGAACTGACA TCGAGTCTAA AGGTGTGTGT TTGTCGGTCC GCGCAGTGCC GTTGATGGAA
AACCATGAGC GAATCGGTGC AGTCCTGATG TGTCGTGATG TGTCTGAGCT GCGCCGCAGA
GAGCGTGAGT TAATTACCAA GGACGCCACG ATTCGCGAAA TTCACCACCG TGTGAAGAAC
AACTTGCAAA CCGTGGCTGC CCTGTTGCGT CTGCAAGCTC GACGGATGAC AGTTCCGGAG
GCCCGTGAGG CGCTCGAGGA AGCGATGCGC CGGGTGTCGA CGATCGCGCT GGTGCATGAT
TCGTTGTCAC AGACCCTTGA TGAAGAAGTT GAGTTTGATG TCATGGTGGG GCGTGCTTTA
CGGCTCGCAG CCGATGTTGC TTCTGCTGGT GTGTCCGTCC GCACGATTCA GCGTGGTGAG
TTCGGGCTGA TTCCGGCGCA AACAGCGACC CCACTTGCGT TGGTGCTCAC TGAGTTGGTG
ACCAACGCGG TGGAGCATGG TTTGTCTGGG CAAACTGGTG GCACAGTAGA GATCCGGGCG
GAACGCACAG GGCAGCATTT GCGTGTGGAC GTCCTCGACG ACGGTATGGG ATTAGGTGAC
TCAGGCTCGC CTTCGTCCGG TCTCGGTACC ACCATTGTGC GAACCTTGGT CAGTAATGAG
TTGCAGGGCG ACATCGAGTG GGCGCCTCGT GACCTGGGTG GAACCAGAGT GACGATCACG
TGCGACTTAC TGTGA
|
|---|
| Protein sequence | MSTLSDLVER YGYLEPHQVE WLHLLVGDWQ LISDLAFADL VLWLPTDDGN FVALAQCRPS
TGATVHYDDI VGTMAPDTVR SQLEKALVEE SIQRSREPRW FGTYAVREEA VPVNCHGHTI
AVVARQTNLG AGRTPSRMEM NYVEAADDLM TMIAASEFPH PDAATGSRRG APRVGDGLLR
LNAEGDVLYA SPNALSCFHR LGVLGPLVGQ SLVEVTADLI EHKVPVDESM PLVMMGRAPW
RTDIESKGVC LSVRAVPLME NHERIGAVLM CRDVSELRRR ERELITKDAT IREIHHRVKN
NLQTVAALLR LQARRMTVPE AREALEEAMR RVSTIALVHD SLSQTLDEEV EFDVMVGRAL
RLAADVASAG VSVRTIQRGE FGLIPAQTAT PLALVLTELV TNAVEHGLSG QTGGTVEIRA
ERTGQHLRVD VLDDGMGLGD SGSPSSGLGT TIVRTLVSNE LQGDIEWAPR DLGGTRVTIT
CDLL
|
|---|
| |