| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1879 |
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| Symbol | |
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| ID | 8381043 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 2057794 |
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| End bp | 2059260 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 645004633 |
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| Product | beta-galactosidase |
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| Protein accession | YP_003161825 |
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| Protein GI | 256833098 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2723] Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase |
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| TIGRFAM ID | [TIGR03356] beta-galactosidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.251034 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACATCCT TTTCTTACAC CCCGCCCACT GACCGTTCCG TCACCTTCCC CGATGGTTTT
TTGTGGGGAG CAGCAACGGC CGCCTACCAG GTGGAGGGCG CAGCTCATGA AGATGGGCGC
CGCGATTCCA TTTGGGACAC TTTCTCCCGA GTTCCTGGTG CGGTCCTCGA TGCGCACAAC
GGTGATGTCG CTTGCGATCA ATACCACCGA TATGCCGATG ACGCGAAGTT AATGGCTGAC
CTTGGTATCC AAACCTATCG GTTTTCCACG TCGTGGGCTC GGGTACGACC TGATGGGGTC
AGCGGTCCGG AAGGCGTGAA TGCGCAGGGG CTGGATTACT ATTCGCGACT TGTTGATTCC
TTGTTGGACA ACAACATTTT GCCGTGGCTG ACGCTGTACC ACTGGGATCT TCCTCAGGCG
TTAGAAGATC AAGGCGGCTG GGCAAACCGC GACGTCGTGG ACTTGTTTGT CGAGTATGCG
ATGACGGTTC ATGACGCGTT GGGTGACCGG GTCCGGGTGT GGACAACGTT GAATGAGCCA
TGGTGCTCAT CGTTCTTGTC CTACACGGCG GGAGTTCATG CCCCTGGGCG TACCTCGCCA
GCTGATGGGT TGGCTGCAGC GCACCACCTT CTTCTTGCAC ATGGTAAGAC CATCCAAGAG
TTGCGGTCAG CAGCCCCTGA CGCTGAGCTG GGTATCACAC TGAACTTCAC GGTTCCAGAC
CCGGTTGACC CGTCAAACCC TGATGATGTT GATGCGGCTC GCCGAATTGA CGCTCAGTTT
AACCGCGTGT TTGCTGATCC GATTTTCCGT GGCGAGTATC CTGCTGATCT GTTGGAGGAC
CTAGCCGCAG TGGGTTTGCG TGAGGGCTTT GACAAGGTCG TTCACGATGG TGACTTGGAG
ATTATTTCCA CTCCGATCGA TGCGTTGGGT GTGAATTACT ACCATGGCGA AGCGAACTCG
AAGACTCCGC CACCTGATTC GCTGGTTGGC GATGCGCCAG TGGAACGGGA GACTCGTTCT
CCGTACCCTG CGGCGGATGG TGTGTACGTG CACCCTCGTG GGTTGCCGGT GACGGACCAG
GATTGGGAGA TCCAACCTGA AGGGTTAACT CGTTTGTTGC GACGTTTGCA CGCGGAATAC
ACCGGGCCAG CAGGTGTCAA ACTGTACATA ACGGAGAACG GTTGCGCGTT TGATGATGTG
GCAGATGACA ATGACTTTGT GGATGACCAG AACCGGTTGA ACTTCTACGA TCTGCACCTA
CGTGCTGTCC ATGAAGCGAT TGAGAGTGGT GTCCCGGTTC ACGGGTATTT CGCCTGGTCG
TTGCTGGACA ACTATGAGTG GGCGTGGGGT TACCACAAGC GTTTTGGGAT CGTGCGAGTG
AACTACGAAA CCCTGGAGCG TACGGTGAAG GCCTCTGGTG AGTGGTACCG CACTGTTGCC
ACAACGAATA CGGTCCCAGC ACGGTAG
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| Protein sequence | MTSFSYTPPT DRSVTFPDGF LWGAATAAYQ VEGAAHEDGR RDSIWDTFSR VPGAVLDAHN
GDVACDQYHR YADDAKLMAD LGIQTYRFST SWARVRPDGV SGPEGVNAQG LDYYSRLVDS
LLDNNILPWL TLYHWDLPQA LEDQGGWANR DVVDLFVEYA MTVHDALGDR VRVWTTLNEP
WCSSFLSYTA GVHAPGRTSP ADGLAAAHHL LLAHGKTIQE LRSAAPDAEL GITLNFTVPD
PVDPSNPDDV DAARRIDAQF NRVFADPIFR GEYPADLLED LAAVGLREGF DKVVHDGDLE
IISTPIDALG VNYYHGEANS KTPPPDSLVG DAPVERETRS PYPAADGVYV HPRGLPVTDQ
DWEIQPEGLT RLLRRLHAEY TGPAGVKLYI TENGCAFDDV ADDNDFVDDQ NRLNFYDLHL
RAVHEAIESG VPVHGYFAWS LLDNYEWAWG YHKRFGIVRV NYETLERTVK ASGEWYRTVA
TTNTVPAR
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