| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1875 |
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| Symbol | |
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| ID | 8381039 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 2052829 |
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| End bp | 2055465 |
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| Gene Length | 2637 bp |
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| Protein Length | 878 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 645004629 |
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| Product | protein of unknown function DUF214 |
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| Protein accession | YP_003161821 |
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| Protein GI | 256833094 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0737612 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.417003 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTACAAG TCACGCTTTA TCAAATGCGC AAGAACGTGG GCCGTTTAAC GGCTGCAGGG
ATTGCAATTC TCATTGGAAC CGCGTTTGTT GCGGCGACCT TTGTTGCCGG CCAGTTGCTG
GTGGCAACGT CCACCAACGC CATGACCACG GAGTTTGGCG ACTCTGACAT GGTGGTCCTG
GGCGACTACC AGAAGGACTC TGGGGAATGG GTCAATGAAC CGCTCACCCA AGATGACCTC
TACACGGTTG CTAGCACGCA GGGGGTGGCC ACTGTGTCGG CCACGTCCGC GTACTGGTTC
CAGGTGACTG CTGGGCAAAA GTCCGACTAT GTGAAACCCA CCTTTACCTC TGAAGATGAC
CGACTTGTGG TTCCTCATCT GGACACAGGG GCTGTCCCAA CCCAGGATGG CCAGGTGGCG
TTGGACGCCA ACATTGCGGA ACGGTTGGAG GTCTCTGACG GAGACACCAT CACCATGCTT
GGTGGTGATG ACACCTCATC AGGTGTGTCG TTGACGGTCA CCGGAACAAC GAGCGACCCG
TCGGGGGCGT TTGTCGCCAC AGGTGGGGGC GCTTTGATGA CCCCAGGAAC CCTCCAGCTG
ATTCTAAATG CTGCCGGTGA CGACAGTGAT GCACCGTTCT CGACATTGAT GTTCACAGTG
GACGACGATG CTGTTCCTGC CACTATTGCC GATGCGCTGG CTGGGTCGGT CGATGGACGT
CCAGTATTGA CGATCGACCA GTATGCGGAA CAGCAACTGA GTTCGTTGAC CGGTCAAGCC
AACATCATGA CGATGATCGT GTTGATGTTC GCCGCGATCG CTCTGTTTGT TGCTGGGCTG
GTGATCTCTA ATACGTTCCA GGTGTTGGTG GCACAACGCG CACACACTTT GGCGTTGCTG
CGGTGTGTGG GAGCGAACCG GAAGCAGATC CGAAATTCTG TCCTTGTCGA AGCAACACTT
TTGGGCGTGG CCTCGTCCCT GGCTGGGATC CTCGCAGGCA TTGGCCTGGT CCAGGGTGTC
TTGCTGGTGT TGACTCAGCT TGAGGTGTCC ACGTCAATCC CGGACACGGT CACGATCCCG
CTGACAGCCG TGTGGGTTCC TCTTGTTGTG GGTACCCTGG TCACGGTTCT TGCCGCTCTG
GTTCCCGCAC GCATCGCCAC AAAAGTTTCT CCGCTCGCGG CACTTCGCCC ACAAGAAGGA
GCGGGCGAAG GTGGTCGCCG CGTGGGGATT CTGCGACTCA TCACCTCTGG GCTGTTGACT
GTTGGTGGGG GCGCTTTGCT TGCTGGTTCT CTCGTGATGG CAAAGGATTC CACCGAACTT
GGTCCTCTTG TCGCTGTGGG GATCCTTGGC GGGGCACTCA CCTTCATTGG ACTCATCACC
TCCTCGATGC TGTGGATGCC CAAGGTTGTG TCCACAGTGG GCAACCTGTT CAACAAGCTG
GGGGCGCCAG CGAAACTTGC CAGTGCGAAC ACGATGCGCA ACCCACGGCG CACAGCAGCA
ACATCGACGG CTTTGTTCAT TGGAGTCACC CTGGTTGCCA TGCTGTCAGT AGGGGCCGCA
ACAACCCGCG CCACGATGAA TACAGAACTG GACAACCAGT TCCCTGTGGA TGCGATCGCG
GAAACGTGGG GCAGTGACAA CACCATCGCC TCAGACGCGG ATGTGGAACG CACTGTGCGC
GACCTACAAG CAATTGATGG GATTAACACG GTTGCGTATG GACGCAACGT GGCACTCGCA
TCAGAGTTCC CCGGCGAGAA CAGCGACGGA TACCCCAACC GTCAAGTGAC CGCGGTGAAC
CCTGACGAGT TCAGGGCAGC GCTTCGTGAC CCCTCTCTGG CTGCGATGGT CACAGAAGGT
ACGTATCTGC TTGGGGCATG GGATGACGCC ACACACGTCA AGGACACCGC ATCGTTCTGG
GTTGCTCCCA CGTCGAATGA CGCCGGAGAC CTCCCTCCCG CTGCGGAACA GCCTGGCTAC
AGCAACGCGC ACAGTCTGAC TATCGCCAAA GGGTTTGGGC ATAGCTACGG GATCATCACT
GACACTGACC TTGATGCGAT CCTCGCGTCA GATCCCACCG GGGACACCCA CCCCACGGCA
ACCTTCTTCA TCAAGGTTGA CGACGTGAAC AATGCTGGCG ACGCCATGAA CGCCGTCCGT
GACTACTTCG GCGAAGACAA CGTCAGCGTG ACCGGGCTCG TCCTTGAACG CGAGTTCTAT
CAAAAGGCCA TTGACGTGAT GCTTCTTGTC CTGGTGGGCC TGCTTGGTGT CGCCGTCCTC
ATTGCACTCA TCGGTGTTGC CAACACACTG TCTCTCTCTG TCATTGAACG GCGACGCGAA
TCAGCCACCT TGAGGGCTGT GGGAATGTCC AAACGACAAC TTCGACATTC GCTGGGGATC
GAGGGAATGC TCATCGCAGG AATTGGGGCG TTCGTCGGAG TGCTTGTCGG CGCGCTGTAC
GCATGGTTAG GGGCGCAACT CCTCTTCGGT GGATTCGCAA CCCCCATCTT TACGGTGCGA
ATCTGGGACA TCGTCCTCAT TATGGCTGTG TCGATCGGAG CTGGACTGCT CGCCTCAGTT
GTCCCTGCAC GCGGTGCAGC ACGCACCTCC CCCGTTGCAG CGCTTGCAGT GGAATGA
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| Protein sequence | MLQVTLYQMR KNVGRLTAAG IAILIGTAFV AATFVAGQLL VATSTNAMTT EFGDSDMVVL
GDYQKDSGEW VNEPLTQDDL YTVASTQGVA TVSATSAYWF QVTAGQKSDY VKPTFTSEDD
RLVVPHLDTG AVPTQDGQVA LDANIAERLE VSDGDTITML GGDDTSSGVS LTVTGTTSDP
SGAFVATGGG ALMTPGTLQL ILNAAGDDSD APFSTLMFTV DDDAVPATIA DALAGSVDGR
PVLTIDQYAE QQLSSLTGQA NIMTMIVLMF AAIALFVAGL VISNTFQVLV AQRAHTLALL
RCVGANRKQI RNSVLVEATL LGVASSLAGI LAGIGLVQGV LLVLTQLEVS TSIPDTVTIP
LTAVWVPLVV GTLVTVLAAL VPARIATKVS PLAALRPQEG AGEGGRRVGI LRLITSGLLT
VGGGALLAGS LVMAKDSTEL GPLVAVGILG GALTFIGLIT SSMLWMPKVV STVGNLFNKL
GAPAKLASAN TMRNPRRTAA TSTALFIGVT LVAMLSVGAA TTRATMNTEL DNQFPVDAIA
ETWGSDNTIA SDADVERTVR DLQAIDGINT VAYGRNVALA SEFPGENSDG YPNRQVTAVN
PDEFRAALRD PSLAAMVTEG TYLLGAWDDA THVKDTASFW VAPTSNDAGD LPPAAEQPGY
SNAHSLTIAK GFGHSYGIIT DTDLDAILAS DPTGDTHPTA TFFIKVDDVN NAGDAMNAVR
DYFGEDNVSV TGLVLEREFY QKAIDVMLLV LVGLLGVAVL IALIGVANTL SLSVIERRRE
SATLRAVGMS KRQLRHSLGI EGMLIAGIGA FVGVLVGALY AWLGAQLLFG GFATPIFTVR
IWDIVLIMAV SIGAGLLASV VPARGAARTS PVAALAVE
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