| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1870 |
|---|
| Symbol | |
|---|
| ID | 8381034 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | - |
|---|
| Start bp | 2047649 |
|---|
| End bp | 2049010 |
|---|
| Gene Length | 1362 bp |
|---|
| Protein Length | 453 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 645004624 |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_003161816 |
|---|
| Protein GI | 256833089 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0808061 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.233739 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGTAGAC GACTCATTAT GGCAACGGTG TCAGCCGTCG TCATGGCAGT CATCCTGTTG
GGATTCCCGC TCGCGTTTTT CGGCGGCTAC TACGTGTTTG AAACTGAACT ACGGGAAGTG
AACCTGCGGC TTGGTGGGTT AGCACGGCAA GTCGAAAACC GGGTGCAACG TGGTGAGGAG
TTAGACCAGG ATTTCCTTGA CCGGTATGTC GGCGGTGAGG GCAGCGCCAT GCAGGCACAC
GTGCGTGTCA TTATGCCCAC CGGTGAGAAT GGTGTGGCGG GGGATCCCAT TGAGGGGCGT
GTCTTGCGGG CCTCCGAATT GACTGGATCG AATGCACTGG TCACTCTCGA AGTGTCGTAC
TGGGATGTCG TGGGTCGCTC TGCGCAAGTG GTGGTTCTTG TGATCGCTGC TGCTCTGGTG
GCCTTCGGCG GTGGCATCAT CATGGCGGTG TGGCAAGCGA ACCGTTTGTC GGCACCGCTT
GTCTATTTAG CGGCGTCTGC GGAACAGCTG GGGTCGGGGC AGGTGCGTCC TCAACTGGAA
GAGTCTGGTG TTGAAGAAAT TGATCTTGTC GCTGCTGAAC TTGCCCGATC AGCGGATCGA
CTAGCCGGGC GTATTGCTGC CGAACGGCAG TTCGCCTCCG ATGCTTCGCA TCAACTGCGA
ACACCGTTAA CGGCGCTCAT GATGCGCCTT GAAGAGATTC AGATGCTGTC CGATGACAAC
CCTGACGTTC AAGAGGAAGC ACGGATCTCA CTGGAACAGG TGGAACGCCT CGTGGGAACT
GTGGATGACT TGTTGGCCCG GTCACGACGC TCCTCTGGGG GAACTGCGGA AGCGATTTCT
CTCCGCGAAG TGATGCAACA ACAAGAGGAA GAGTGGGAGC CAGTTTTTGG AAAAGCTCAT
CGAGACCTTG CGGTGATCCA AGATGGTGAA CTCACTGTGT TTGCAACCCC TGGTGCTTTG
GCTCAGGTGC TTGCGACTCT CATTGAAAAC TCCTTGAAGC ATGGTGGTGG GAAGACAACA
GTGCATGCCC GCCAACAAGG CCCACGAGGC GCTGTTGTTA TCACCGTTGA GGATGAAGGT
GACGGGGTGC CAGACGAGTT GGCATCAGAG ATTTTTGAAC GTGGGGTGAC ATCAGGAAAT
GGTACCGGGC TCGGATTACC GTTGGCCCGG GATTTGGCTG CTGCTGATGG TGCACGCTTG
GAGTTATCAC GACGACGACC AGCGCTCTTT ACGTTGTATT TGACTGGGCT GGTGCAAACT
ATCGACCCGT CAACAGTGCT ACCTAAAGGT GTGTATGTCT CGACGCAGCG TCGGCGGGGA
TTGTTCCGTC GCCGTTCCGC ACCGCAGTCT TCCCCGAACT AG
|
|---|
| Protein sequence | MRRRLIMATV SAVVMAVILL GFPLAFFGGY YVFETELREV NLRLGGLARQ VENRVQRGEE
LDQDFLDRYV GGEGSAMQAH VRVIMPTGEN GVAGDPIEGR VLRASELTGS NALVTLEVSY
WDVVGRSAQV VVLVIAAALV AFGGGIIMAV WQANRLSAPL VYLAASAEQL GSGQVRPQLE
ESGVEEIDLV AAELARSADR LAGRIAAERQ FASDASHQLR TPLTALMMRL EEIQMLSDDN
PDVQEEARIS LEQVERLVGT VDDLLARSRR SSGGTAEAIS LREVMQQQEE EWEPVFGKAH
RDLAVIQDGE LTVFATPGAL AQVLATLIEN SLKHGGGKTT VHARQQGPRG AVVITVEDEG
DGVPDELASE IFERGVTSGN GTGLGLPLAR DLAAADGARL ELSRRRPALF TLYLTGLVQT
IDPSTVLPKG VYVSTQRRRG LFRRRSAPQS SPN
|
|---|
| |