Gene Jden_1861 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_1861 
Symbol 
ID8381025 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp2038956 
End bp2039285 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content54% 
IMG OID645004615 
Producttranscription factor WhiB 
Protein accessionYP_003161807 
Protein GI256833080 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.254853 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00875656 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTGGAACT TGCTTGACCA CGGGGGACAG TTTCCAAGTG ATGCGAGTCG TCCAGTAGAT 
CAGACATCAG GTGGACTGAG TGTTCTGTTT GCTGAGGGTG ATGATGAAGG CGCTCTTGGT
TGGCAGGAAC GCGCATTGTG CGCGCAAACA GACCCAGAGG CGTTTTTTCC TGAAAAGGGA
GGATCGACTC GTGAGGCAAA ACGAGTATGC ACCTCGTGTG ACGTCCGCGC TGAGTGCTTG
GAATATGCGT TGGCCCATGA TGAACGTTTC GGTATTTGGG GTGGTCTTTC CGAACGTGAA
CGGCGCAAGT TGAAGCGGCG CGCCAGTTAA
 
Protein sequence
MWNLLDHGGQ FPSDASRPVD QTSGGLSVLF AEGDDEGALG WQERALCAQT DPEAFFPEKG 
GSTREAKRVC TSCDVRAECL EYALAHDERF GIWGGLSERE RRKLKRRAS