Gene Jden_1856 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_1856 
Symbol 
ID8381020 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp2030511 
End bp2032019 
Gene Length1509 bp 
Protein Length502 aa 
Translation table11 
GC content57% 
IMG OID645004610 
ProductPhosphomannomutase 
Protein accessionYP_003161802 
Protein GI256833075 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1109] Phosphomannomutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.114337 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00605536 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAGTGCAC ATAAGCCTGG CGTTGATTTA GCCGAGATCA TTAAGTCGTA TGACGTTCGT 
GGGGTTGTTC CCCAGCAGTT GAATGCTGAG GTGGCGCAGG CGATTGGTGC GGCGTTTGCC
ACTGTGGTGG TGATTCCTGA TGCTGGTGAT CGTGCCGATC AGACTCCGGC GGATATTGTG
GCGGCTGGTG GGCGGCGTCC TCAGGTTGTT GTGGGGCGGG ATATGCGCGA GTCGGGGCCG
GAGTTGGTGG CGGCGTTTGC GCGTGGGTTG ACTGCTGCTG GTGTGGATGT TCTTGATATT
GGTTTGTGTT CGACTGATGG TTTGTATCAC GCGTCGGGTG TGTGGGGTAT TCCGGGGGCG
ATGTTTACGG CGTCGCATAA TCCTGCGCAG TACAACGGGA TGAAGTTGTG TCGTGCGGGG
GCGCGTCCGG TGGGTCAGGA TTCGGGGTTG GGTCGGATTC GTGAGTTGGC TCAGCAGTAT
GTGGCTTATG GGTTGCCTGG GGAAGCAACA CAGTTGGGTC AGGTGTCGCG TCGTGAGATG
CTCGGCGAGT ACGCCTCATT TTTGCGGTCT TTGGTTGATA TTTCAGGGAT CCGCCCGTTG
AAGGTTGTGG TTGATGCCGG GAACGGCATG GGCGGGTTGA CGGTTCCTGC GGTGTTTGGT
GATGCGGCAG GGTTGCCGGC GTTGCCGCTG GATATTGTTC CTTTGTATTT TGAGTTGGAT
GGGTCGTTCC CGAACCATGA GGCGAACCCG CTTGATCCGA AGAACTTAGT TGACTTGCAG
CGTGCTGTTG TTGAGCATGG TGCGGATATT GGGTTGGCGT TTGATGGGGA CGCTGACCGG
TGTTTTGTTG TTGATGAGCA GGGGCGGGCG GTGAGTCCAT CGGCGATTAC GTCGTTGGTG
GGGCTGCGTG AGGTCGCTAA GGAACGCGAA GCTGGCCGTG ATCCTGTGGT GATTCACAAC
CTGATTACCT CGCGTGCTGT GCCTGACTTT TTGGAAGCTG CGGGGGCGCG GGTTGTGCGC
ACTCGGGTGG GGCATTCGTT TATTAAGGCG GAGATGGCCT CGCATGAGGC GATTTTTGGG
GGTGAGCATT CTGCTCACTA CTACTTCCGT GATTTCTTCT TTGCAGACAC CGGGATGCTT
GCTGCGTTGC ATGTGTTGGC GGCTCTTGGG TCTCAACCGC ACCCGCTGTC AGCGATCGCA
GACATGTATG AACCGTATGT CGCCTCAGGG GAGATTAACT CTACTGTTCG TGATGTTCCT
GCGGCTCGTG CTCGTATTGT CGATGCGTAT GTGACGAATC AGGGCGGCGG TGAGGTCGTT
GTTGATGAGT TGGATGGGTT GACGGTGTCG CATTGGGAGG GCCACCCGCA GTGGTGGTTT
AACGTGCGGG CGTCGAACAC GGAACCGTTG TTGCGGCTCA ATGTGGAAGC AGCGGATGAG
GACATGATGG TGAAGGTTCG AGATGATGTT CTTGGGCTGA TCCGCGGAAC TGAGGGAGAG
CAGGAATAA
 
Protein sequence
MSAHKPGVDL AEIIKSYDVR GVVPQQLNAE VAQAIGAAFA TVVVIPDAGD RADQTPADIV 
AAGGRRPQVV VGRDMRESGP ELVAAFARGL TAAGVDVLDI GLCSTDGLYH ASGVWGIPGA
MFTASHNPAQ YNGMKLCRAG ARPVGQDSGL GRIRELAQQY VAYGLPGEAT QLGQVSRREM
LGEYASFLRS LVDISGIRPL KVVVDAGNGM GGLTVPAVFG DAAGLPALPL DIVPLYFELD
GSFPNHEANP LDPKNLVDLQ RAVVEHGADI GLAFDGDADR CFVVDEQGRA VSPSAITSLV
GLREVAKERE AGRDPVVIHN LITSRAVPDF LEAAGARVVR TRVGHSFIKA EMASHEAIFG
GEHSAHYYFR DFFFADTGML AALHVLAALG SQPHPLSAIA DMYEPYVASG EINSTVRDVP
AARARIVDAY VTNQGGGEVV VDELDGLTVS HWEGHPQWWF NVRASNTEPL LRLNVEAADE
DMMVKVRDDV LGLIRGTEGE QE