| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1844 |
|---|
| Symbol | |
|---|
| ID | 8381008 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | - |
|---|
| Start bp | 2016512 |
|---|
| End bp | 2018257 |
|---|
| Gene Length | 1746 bp |
|---|
| Protein Length | 581 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 645004598 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003161790 |
|---|
| Protein GI | 256833063 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1887] Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.225555 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGTGA CAGAGAAACA GCCCCGCATC CTCACGGTTC TCCAAAAAGT TCACGCCAAC
CTTCTTGAAC TAGCGGGATA CCCGTTTCTC TTCGCCGGAA TAACTGTCGC GCTCCTCACC
ACAGTTCTCG TTGCCGCGCC AAGCACGTGG ATTGTCGCCG CTGTCATCGT TGTTCTCCTC
ATCGCGGAAA TGACAACCCG CAACTCGTTG CCGACCCCAG AACGGCTCAC CGCACCACAC
GACGGGCGTG CCTACCTCGG TAGTGGCCAT GCACTCCGTG TGCTTCTCTT CATCACAGCC
ATCGCCAGCG CGCTCACCGC CAACGGTGGT ATACGCACTC AACACATCAT CATTGTTCTT
TTTGTTGCTG GACTTCTCCT GGTGGAACCG CTCACCGTAC GGATGGGGCG TCGCGGAGCG
CCGCAAGGTG CACATCTGCC CTGGGCGGCC GAGAACCCAC CATCTTTACC GCCCCAATAC
CCGGCATACG TCGCCAACAA CATCGCGCTT CTTGTGGTGT GCTTTTTTCC CTCAGACCTT
GCTGTTGTGA TCACCCTGCT GTGCACTGCC GTATCCGTTG TGGCGCAGGT TGCGACCTGG
CTGGTGGCAT CACGTCGCAC AAACATCAAA AAACACGTTG ACGCAACCCT CACTCGAGAA
CTGGCCAAGT ACTCACCGCA GTTCTACGTG TACTATGACG CCCCCGTGGG AACCGCCTAT
CAACTCGCCA TGTGGTTGCC CTACCTTGAC CAACTTGGTG AACGGTACGC TGTGATCCTG
CGTAACCAAG CCACCCTCGA TGAAGTTGCA CCACTGACAC AAGCCCCCAT CATCGTGCGC
AAAGACATGG CGTCACTCGA CTCCGTCATC GTTGACTCAG TCAAAGCTGT GTTCTACGTC
AACAACGCCA TTAAGAACGC CCACTTCGTT CGGTTTCACC AGTACACGCA TATCCAACTC
AATCACGGGG ACTCCGACAA ACCGCCAAGC TACAACCCAG CGATGCGCAT GTACGACCGC
AACTTCGTTG CTGGGCAAGC CGCCGTCGAA CGCTACGCGG CACGAGGAGT GGAGACGCAC
CCACATTACT TCGAGATCGT CGGACGCCCA CAAATCACCG GTATCCAACT GACTGAAGCA
GAGACCGTTC CCGCGTCTCC CACTGTCCTC TATGCACCAA CCTGGGCAGG GTTTATGGCG
GACAGTCAAT GCTCCTCTTT GCCCATTGGT CTCGACATCA TCAACGCCTA CGTTGACGCC
GGTGCACGCA TCATCTTCCG TCCGCACCCC CACGCCCGGA ACACTCCTCG GCTACGTACT
GCCTGTGACG CCATTACTGA ACGGTTGACT GCACTCAACG ACACCACGGG AACAGGGCAC
GTCATCGGGG AACAAGCCGA ACGCGAATGG AGCATCATCG ACTGCTTCAA CCAGTCAGAC
ATCCTCGTGT CGGATGTGTC CTCCGTTGTG CCGGACTACC TGTACTCAGC CAAACCCATC
GTCCTCACAG AAATTGGGGT CACTGATCGC GAGGAGTTCC TCACTGACAA CCCCATTGGG
GTGGGTTGCT ACATCCTCCG TGAAGACCTC AGCAACCTCG ACAAAGTTGT CACCGAATCC
ACAACCACAG ACCCACTCAA AGCAACAAGG CTCGCACTGC GAAGCCACTA CCTCGGTGAC
TTCCCAGCCG AAACCTACGA AGAAGCGTTC CTCACCACGG CAGCCCGGTA CGTTCGCGGG
GAGTGA
|
|---|
| Protein sequence | MTVTEKQPRI LTVLQKVHAN LLELAGYPFL FAGITVALLT TVLVAAPSTW IVAAVIVVLL
IAEMTTRNSL PTPERLTAPH DGRAYLGSGH ALRVLLFITA IASALTANGG IRTQHIIIVL
FVAGLLLVEP LTVRMGRRGA PQGAHLPWAA ENPPSLPPQY PAYVANNIAL LVVCFFPSDL
AVVITLLCTA VSVVAQVATW LVASRRTNIK KHVDATLTRE LAKYSPQFYV YYDAPVGTAY
QLAMWLPYLD QLGERYAVIL RNQATLDEVA PLTQAPIIVR KDMASLDSVI VDSVKAVFYV
NNAIKNAHFV RFHQYTHIQL NHGDSDKPPS YNPAMRMYDR NFVAGQAAVE RYAARGVETH
PHYFEIVGRP QITGIQLTEA ETVPASPTVL YAPTWAGFMA DSQCSSLPIG LDIINAYVDA
GARIIFRPHP HARNTPRLRT ACDAITERLT ALNDTTGTGH VIGEQAEREW SIIDCFNQSD
ILVSDVSSVV PDYLYSAKPI VLTEIGVTDR EEFLTDNPIG VGCYILREDL SNLDKVVTES
TTTDPLKATR LALRSHYLGD FPAETYEEAF LTTAARYVRG E
|
|---|
| |