| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1842 |
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| Symbol | |
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| ID | 8381006 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 2013258 |
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| End bp | 2014709 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 645004596 |
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| Product | 4-diphosphocytidyl-2C-methyl-D-erythritol synthase |
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| Protein accession | YP_003161788 |
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| Protein GI | 256833061 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.962652 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.416457 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGGACTG TAGGTGTTGT TCTTGCCGGT GGTGTCGGTG CCCGGTTGGG CTTAAACGTG
CCCAAACAGA TGGTGAAGAT CGCTGGCAAA ACGATCCTGG AACACACGGT CACAGCGTTT
AACGAGTCAC CGGAAATCGA TGAGGTCATC GTCATGATCA CGCCGGGCTG GTCCGAGCAT
GTCGCAACGC TCTTGGGTAA CCGGTTCGAC AAGCTCACGA AGATCCTCGA GGGCGGCTCG
ACCCGAAACG AGACCACACG CAAGGTGTTG GACTCCATCA CTGATGACGA GTGCAAGGTT
GTCCTGCATG ACGCAGTGCG TCCACTTCTT GATGAACGCA TCATCCGAGA GTGCGTGGAG
ACCCTTGATG CCTTTGGTGC CGTGGACGTC GTCATCCCTT CTGCGGACAC CATTGTCGAG
GTCGATGGCA ATGATGTCAT CACCTCCATC CCCAACCGTG CGCTTCTTCG TCGTGGGCAA
ACCCCACAAG CATTTAAGCT GTCAATCCTC AAAGAGGCCT ACGCCAAAGC GATGGATGAC
CCATATTTTG CTGCAACGGA CGACTGTGGT GTTGTGCTGA AGTATCTCCC AGAGGTCCCG
ATCAAAACGG TGCTGGGAGC TGAACACAAC CTCAAGGTCA CCCACCCCGT TGACCTGTTC
ATTGCTGACA AATTATTCCA GTTAGCATCA CGGACAGCAC CCAAGCACAC AACTGAGGAA
GAGCGCGCGG CACTGTTGGC CGGGAAGACA ATTGTTGTTC TCGGAGGTTC CTACGGTATT
GGTGCCGAGA TTTGCCGTAT TGCAGCTGCG AGCGGCGCAA ATGTCGTGTC ACATGGGCGC
TCAACGACTG GACTTCACGT GGAGGACCCT GACGCGATTG CTGCGGCCTT TGAGGAGGTC
TACAAGGAAC ACGGCGCTAT TGACGCGGTG ATTTTGACAG CGGGCGTGCT CCGGATTGGT
CGTCTTTCTG ACACCTCTGA AGAGGAAATC GCAGAGACCA TTGGCGTGAA CTATCTTGCC
CCGGTCCATG TTGCCAAAGC AGCCTACCGT TATTTGTCCG AGTCACGTGG ACACCTGTTG
TTCTTCACCT CGTCGTCATA CACACGTGGC CGAGAAAACT ACTCACTGTA TTCCTCCACA
AAGGCTGCGA TTGTCAACTT GACCCAAGCT CTGTCTGAAG AATGGACGGG TCAAGGGATC
AAGGTCAACG TCGTCAACCC GGAACGTACT GCCACCCCTA TGCGCTCCAA AGCGTTTGGT
GAGGAATCTC CCGGTTCGCT GTTGTCTGCG GTGTCTGTTG CGGAAACTTC TCTGGACGTC
ATCACCTCCG ACATGACGGG GCTCGTTGTC GATGTCCGCA AGGAGCAAGC TGGTGCGCGT
TCGGCTGGTG ACGCGATCAA TGAGGCGCTG TCCGAAGCAG AACGCGAGTT GTCCACCCCT
GATATCCCGT AG
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| Protein sequence | MRTVGVVLAG GVGARLGLNV PKQMVKIAGK TILEHTVTAF NESPEIDEVI VMITPGWSEH
VATLLGNRFD KLTKILEGGS TRNETTRKVL DSITDDECKV VLHDAVRPLL DERIIRECVE
TLDAFGAVDV VIPSADTIVE VDGNDVITSI PNRALLRRGQ TPQAFKLSIL KEAYAKAMDD
PYFAATDDCG VVLKYLPEVP IKTVLGAEHN LKVTHPVDLF IADKLFQLAS RTAPKHTTEE
ERAALLAGKT IVVLGGSYGI GAEICRIAAA SGANVVSHGR STTGLHVEDP DAIAAAFEEV
YKEHGAIDAV ILTAGVLRIG RLSDTSEEEI AETIGVNYLA PVHVAKAAYR YLSESRGHLL
FFTSSSYTRG RENYSLYSST KAAIVNLTQA LSEEWTGQGI KVNVVNPERT ATPMRSKAFG
EESPGSLLSA VSVAETSLDV ITSDMTGLVV DVRKEQAGAR SAGDAINEAL SEAERELSTP
DIP
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