Gene Jden_1840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_1840 
Symbol 
ID8381004 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp2011666 
End bp2012967 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content56% 
IMG OID645004594 
Producthypothetical protein 
Protein accessionYP_003161786 
Protein GI256833059 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.813985 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.403532 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTAAGA TCCTCATTCG AGCAGCACAA AACCCTCTGA AGACCTACGG CACGATGGAA 
TCAACACGGC TGATGGGCGG GAACTCCGGA AACCTCCTGT ACGCAAATGG TGTGGCACGC
GCGTTATCTG CACGGGCCAA TACCGTCCGA TATGGAGGGT TTACCACCCA CAGGCTGGAT
GATCCTGCTG AGTTTATTCG CGAAACAAAT GATAAATATG ACCACTATGT CATGCCGATG
TCGAACATGT TCCGGGCGTC GTTCACCGCG AATCTCAAAG CGATGACTCG GATTGTCCGA
GACCTCGACA TGCCGGTGAC TATCGTTGGT GCGGGGGCGC AAACCACTGC AGACGCCGCA
GAGAACGACG AGTTTCGGAT GGCACGCACC GGGAGGACGA AAACACAGGC TGAGGATGCT
GCAAAACGCC ACAACGATGT CGTGCGTATG TTTTGTGAAG CGATCCTTGA AAAGTCGCAC
TCGATGGGAG TTCGCGGTGA GTTCACGCAG AAGTACCTGG TGTCGCTTGG GTTACCTGAA
GAGCGCATCC GCGTCATTGG GTGCCCGTCG ATCTTCACCT GGGGGCCAGA ACACCGGGTA
GAAAAGAAGG TAGCAGCCCT TGGGCCAAAG TCGTCCATCT CGATGAACAT TGATTACCGG
GTTCCTGGTA TCGAGCGCGT CATCGACGCG AACATGGCGC AATACCGGAA CCTGACAAGT
CCCTCGCAGG ATGCCAAGTC TGCCCGGATG ATTATCACCG GGGAGGACCA GTACGACCTG
TCCACGGTAA ACCTCGGAAC ACCGGTCCAC ACCGGACACC CTCTGTTCGC CCGCCGCAAC
GTGATCTACT ACCCCAACCC CTGGGGGTGG ATCGAGTCCT TCAAGAGCGA AGACTTCGCA
TTTGGGACAC GGTTACACGG AAACATTGCC GCAATTCTTG CGGGGACACC AGCGCACATT
CTTGCGCATG ATTCACGGAC TCTTGAGCTG GCTGACTACC ATGCGATGCC GTACACCCGG
TACGACAAGG ACGGCGCTGT CCCGCTTGCT GAGGACCTTT ATCGGGACAC CGATTACAGC
CGGTTCAACG AACTGATGCC TGAGCGTTTT GCCACCTATT TGCAGTTCTT GCGTGATAAT
AACTTGCACA CGATCTGGGA CGAGGACGGA ACTGCTGACC GCTTCGACCA AAAAATCGAG
GCAGGGAAGA AGATCGGGGC AGTGCGTCCA CCGCAAACAA ACCCTGCCCT CATCACGTTG
GCAAAGGTCA AGCGCAAGGC GCGCGCCCTA TTGAAGCGCT GA
 
Protein sequence
MSKILIRAAQ NPLKTYGTME STRLMGGNSG NLLYANGVAR ALSARANTVR YGGFTTHRLD 
DPAEFIRETN DKYDHYVMPM SNMFRASFTA NLKAMTRIVR DLDMPVTIVG AGAQTTADAA
ENDEFRMART GRTKTQAEDA AKRHNDVVRM FCEAILEKSH SMGVRGEFTQ KYLVSLGLPE
ERIRVIGCPS IFTWGPEHRV EKKVAALGPK SSISMNIDYR VPGIERVIDA NMAQYRNLTS
PSQDAKSARM IITGEDQYDL STVNLGTPVH TGHPLFARRN VIYYPNPWGW IESFKSEDFA
FGTRLHGNIA AILAGTPAHI LAHDSRTLEL ADYHAMPYTR YDKDGAVPLA EDLYRDTDYS
RFNELMPERF ATYLQFLRDN NLHTIWDEDG TADRFDQKIE AGKKIGAVRP PQTNPALITL
AKVKRKARAL LKR