Gene Jden_1838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_1838 
Symbol 
ID8381002 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp2007294 
End bp2009909 
Gene Length2616 bp 
Protein Length871 aa 
Translation table11 
GC content55% 
IMG OID645004592 
ProductSpoIID/LytB domain protein 
Protein accessionYP_003161784 
Protein GI256833057 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG2385] Sporulation protein and related proteins 
TIGRFAM ID[TIGR02669] SpoIID/LytB domain 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.353956 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTGGGTGT TGGTGAAGGA CGGGAATCTC AGTGGAAGAA ACTTGGTAAA AACCCTGCAG 
GTCACCACCC TTCACGCCGA TGAGTACTCA TACAGACATG ATGCGTACAC CCGCCCACCT
GAGGGTTCCG TTTTTCACCC AGCGAACCCC GATGAGTACC TGCAGACTGG ACTTATGCGT
TTTCTGACAT TTCTGAAGAT CCTTCTCGTG GCCGCACTTG CAGCGTCGGG GGCGTCCCTC
ACCGCTGCTC CAGCGTTGAG TTCTCCGGGA GGAGGGACCG CATCAGGATT GTCGATGTCC
AATAGTGTGC GTTTTGCAGC CGCTACGTCG GCGAGCACGG TGAGTCCGAA TACGCGGACC
GTGTTTGCGA CTGCTTACCA CCGCAATGGG CAAGCGATGA CGGGCAATGT CCAGTTGCAG
TACCGCAAAA CCGCAGGATG GAAGACGCTG AAAACTCTTC CGTTGGATAA TGGTCGGGCT
CGTTTGGTGC GCGTGCCCAA GTCAACCTCT GATTACCGAT GGCGTTATGT ACCAACTGGC
GCGACCACAC GGACGTTCTC TGTTGCGGTG AGGCCAGCAA CCTCGCAGTC TCCTTCCACA
CGGTTTGCTG CAGCGGTCTC CTCGTCTTCA GTGTTCCCTG GCACAAAAAC CACCTTCGCG
ACCGCGTATC ACCGTAGCGG AAAAGCAATG ACCGGTAACG TACAGCTCCA GTACAAATCT
GGTTCAACGT GGAAGACGCT GAAAACACTT CCCTTAGTTG ATGGACGAGC GAAGTTTGTG
CGTGTCCCAA AGACAACATC AACCTATCGG TGGCGTTCCA CGTCGACCGG TGCAACGACT
AAGTCTTTCC AGGTGACAGT GAAACCGCAT ATTACCCTGT CAACGACGGC GTCGTCTGTG
ACAAAGGGTG GGAGCGTGAC CTTAAAGGGC AAGTACACGC GTGGCGGCAA AGTCGTGACG
TCAGGAACCG TCACCCTTCA GTATTTGTCG GGATCGACCT GGAAGAACAT TCGCACTGTT
TCGGTGTCCC AAGGAACGGC GTCAACTTCG GTGAAACCGT CAAGCACCAC AACGTACCGG
ATGGTTGCTT CAGATGCGAA CAGCAGTTCG GTGAAAGTGT CAGTCACCGG TGCGTCAGTT
ACATACTGGG TGGACTCAAG CGTTGGCCTC AACGCACGTT CCGGTCCTGG AACCAGCTAT
AGCAGCCTTG GCATGTTCGC CAACGGAACC CAGTTGACCC ACGATCCAGC CAAGGTCCAA
ACAGGCGGTG GGTACACGTG GCGTCAGGTC ACGGGAAAGA TCGGCGGCAA AACTGTGACC
GCCTGGGTTG CAGACTCCTA CCTGACAACC GTAAAACCCA CACCACCTCC ACCTGCAACG
GTTCCAGCAT CCTTCACCCT GACCGGGTCA GGGTTTGGCC ACGGGGTAGG AATGTCGCAA
TTCGGGGCGT ACCAGATGGC TCGCGAAGGA AAGAACGCCA CCCAAATCCT GCAGCACTAC
TACACCGGTA ACACGGTGAA AAACTTCGTC TCGTCCAAGC AGTACATCAA CGTTCAGCTC
ATTGGGCCTG GCTTCAATAA CCAAACTGCG ACCACGCGTA CAGTCAGTTT CAAGAATGGG
GCCGCTGGGA CATGGCGCCT TGTTGACAAG TCAGGAAATA TTCTCACTGG CTTTTCCAAG
CGACCCACAT CGCAATCGGT CCGCCTTGAG GTGTCCGGAA CCAATGTGAA AGCCACGCTG
CTTGACTCCT CCGGCAAAGC GACAACCACC ACAGCCACTG CCTCTCACAT TTACGTGCGC
TGGTCTGGGA CTAGCCGGTT CTTGTCCACG GGGCCAGCAA GCGTCGCAAC CGTCCAAGGG
TCAATTTCGT CCAGCCGAAG CGGCAACTAC CGGCACGGAC AACTCATCGT GACAACGTCG
TCAAAGACGC TCAACATTGT CAACAACCTC AAGTTCCAAA CCGAATACCT GTACGGGATC
GCGGAAATGC CGTCCGGGTG GGGATATAAC GGTGGTCAAG CTGCGCTCCA AGCACAAGCA
ATCACCGCGC GCACCTATGC ACAAAACCGC CTCAACAGTG CACTCAACGG AACCTGTAAC
TGTCACATCG TTGACACCAC TCAACACCAA TTCTTCACGG GGTGGGACAA AGAGAACGAA
GGCACCGCAG CCTACTACGG GAAGAAATGG AAGGCTGCAG TCGACGCTAC CCGATCATCT
GCAACGACAG GTCTCGCCTT GTTCAACGGC AGCACGCTAT CTGGGTCTTA CTATTACTCA
GCTTCCGGTG GGCGCACCGC TAACTCAGAA GATGTCTGGG AATCGCAAGT GAGCTACCTC
CGCTCCGTCA ATGACCCCTA CAGTCTGAAA GCACCAGGGA ACTCCAACGC CAGTTGGACT
GACACAGTCA CGCAGAAAAC GTTGAAGAAC ATCTTCACAT CACTCGACGA CGTGAAGACC
GTGACAGTAT CCGCAACCTA CAGTTCAGGG CAAGTGAAGT CACTGACCGC CATCTCAAGC
ACCGGGCAAA AACAAACACT GACCGCAAAA GCAGACACCT GGCGTTCCCG TCTCGGTACG
AAAGCCGCGT GGATCACCAA AATCACGGCA AACTAG
 
Protein sequence
MWVLVKDGNL SGRNLVKTLQ VTTLHADEYS YRHDAYTRPP EGSVFHPANP DEYLQTGLMR 
FLTFLKILLV AALAASGASL TAAPALSSPG GGTASGLSMS NSVRFAAATS ASTVSPNTRT
VFATAYHRNG QAMTGNVQLQ YRKTAGWKTL KTLPLDNGRA RLVRVPKSTS DYRWRYVPTG
ATTRTFSVAV RPATSQSPST RFAAAVSSSS VFPGTKTTFA TAYHRSGKAM TGNVQLQYKS
GSTWKTLKTL PLVDGRAKFV RVPKTTSTYR WRSTSTGATT KSFQVTVKPH ITLSTTASSV
TKGGSVTLKG KYTRGGKVVT SGTVTLQYLS GSTWKNIRTV SVSQGTASTS VKPSSTTTYR
MVASDANSSS VKVSVTGASV TYWVDSSVGL NARSGPGTSY SSLGMFANGT QLTHDPAKVQ
TGGGYTWRQV TGKIGGKTVT AWVADSYLTT VKPTPPPPAT VPASFTLTGS GFGHGVGMSQ
FGAYQMAREG KNATQILQHY YTGNTVKNFV SSKQYINVQL IGPGFNNQTA TTRTVSFKNG
AAGTWRLVDK SGNILTGFSK RPTSQSVRLE VSGTNVKATL LDSSGKATTT TATASHIYVR
WSGTSRFLST GPASVATVQG SISSSRSGNY RHGQLIVTTS SKTLNIVNNL KFQTEYLYGI
AEMPSGWGYN GGQAALQAQA ITARTYAQNR LNSALNGTCN CHIVDTTQHQ FFTGWDKENE
GTAAYYGKKW KAAVDATRSS ATTGLALFNG STLSGSYYYS ASGGRTANSE DVWESQVSYL
RSVNDPYSLK APGNSNASWT DTVTQKTLKN IFTSLDDVKT VTVSATYSSG QVKSLTAISS
TGQKQTLTAK ADTWRSRLGT KAAWITKITA N