Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_1838 |
Symbol | |
ID | 8381002 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | + |
Start bp | 2007294 |
End bp | 2009909 |
Gene Length | 2616 bp |
Protein Length | 871 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 645004592 |
Product | SpoIID/LytB domain protein |
Protein accession | YP_003161784 |
Protein GI | 256833057 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG2385] Sporulation protein and related proteins |
TIGRFAM ID | [TIGR02669] SpoIID/LytB domain |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.353956 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTGGGTGT TGGTGAAGGA CGGGAATCTC AGTGGAAGAA ACTTGGTAAA AACCCTGCAG GTCACCACCC TTCACGCCGA TGAGTACTCA TACAGACATG ATGCGTACAC CCGCCCACCT GAGGGTTCCG TTTTTCACCC AGCGAACCCC GATGAGTACC TGCAGACTGG ACTTATGCGT TTTCTGACAT TTCTGAAGAT CCTTCTCGTG GCCGCACTTG CAGCGTCGGG GGCGTCCCTC ACCGCTGCTC CAGCGTTGAG TTCTCCGGGA GGAGGGACCG CATCAGGATT GTCGATGTCC AATAGTGTGC GTTTTGCAGC CGCTACGTCG GCGAGCACGG TGAGTCCGAA TACGCGGACC GTGTTTGCGA CTGCTTACCA CCGCAATGGG CAAGCGATGA CGGGCAATGT CCAGTTGCAG TACCGCAAAA CCGCAGGATG GAAGACGCTG AAAACTCTTC CGTTGGATAA TGGTCGGGCT CGTTTGGTGC GCGTGCCCAA GTCAACCTCT GATTACCGAT GGCGTTATGT ACCAACTGGC GCGACCACAC GGACGTTCTC TGTTGCGGTG AGGCCAGCAA CCTCGCAGTC TCCTTCCACA CGGTTTGCTG CAGCGGTCTC CTCGTCTTCA GTGTTCCCTG GCACAAAAAC CACCTTCGCG ACCGCGTATC ACCGTAGCGG AAAAGCAATG ACCGGTAACG TACAGCTCCA GTACAAATCT GGTTCAACGT GGAAGACGCT GAAAACACTT CCCTTAGTTG ATGGACGAGC GAAGTTTGTG CGTGTCCCAA AGACAACATC AACCTATCGG TGGCGTTCCA CGTCGACCGG TGCAACGACT AAGTCTTTCC AGGTGACAGT GAAACCGCAT ATTACCCTGT CAACGACGGC GTCGTCTGTG ACAAAGGGTG GGAGCGTGAC CTTAAAGGGC AAGTACACGC GTGGCGGCAA AGTCGTGACG TCAGGAACCG TCACCCTTCA GTATTTGTCG GGATCGACCT GGAAGAACAT TCGCACTGTT TCGGTGTCCC AAGGAACGGC GTCAACTTCG GTGAAACCGT CAAGCACCAC AACGTACCGG ATGGTTGCTT CAGATGCGAA CAGCAGTTCG GTGAAAGTGT CAGTCACCGG TGCGTCAGTT ACATACTGGG TGGACTCAAG CGTTGGCCTC AACGCACGTT CCGGTCCTGG AACCAGCTAT AGCAGCCTTG GCATGTTCGC CAACGGAACC CAGTTGACCC ACGATCCAGC CAAGGTCCAA ACAGGCGGTG GGTACACGTG GCGTCAGGTC ACGGGAAAGA TCGGCGGCAA AACTGTGACC GCCTGGGTTG CAGACTCCTA CCTGACAACC GTAAAACCCA CACCACCTCC ACCTGCAACG GTTCCAGCAT CCTTCACCCT GACCGGGTCA GGGTTTGGCC ACGGGGTAGG AATGTCGCAA TTCGGGGCGT ACCAGATGGC TCGCGAAGGA AAGAACGCCA CCCAAATCCT GCAGCACTAC TACACCGGTA ACACGGTGAA AAACTTCGTC TCGTCCAAGC AGTACATCAA CGTTCAGCTC ATTGGGCCTG GCTTCAATAA CCAAACTGCG ACCACGCGTA CAGTCAGTTT CAAGAATGGG GCCGCTGGGA CATGGCGCCT TGTTGACAAG TCAGGAAATA TTCTCACTGG CTTTTCCAAG CGACCCACAT CGCAATCGGT CCGCCTTGAG GTGTCCGGAA CCAATGTGAA AGCCACGCTG CTTGACTCCT CCGGCAAAGC GACAACCACC ACAGCCACTG CCTCTCACAT TTACGTGCGC TGGTCTGGGA CTAGCCGGTT CTTGTCCACG GGGCCAGCAA GCGTCGCAAC CGTCCAAGGG TCAATTTCGT CCAGCCGAAG CGGCAACTAC CGGCACGGAC AACTCATCGT GACAACGTCG TCAAAGACGC TCAACATTGT CAACAACCTC AAGTTCCAAA CCGAATACCT GTACGGGATC GCGGAAATGC CGTCCGGGTG GGGATATAAC GGTGGTCAAG CTGCGCTCCA AGCACAAGCA ATCACCGCGC GCACCTATGC ACAAAACCGC CTCAACAGTG CACTCAACGG AACCTGTAAC TGTCACATCG TTGACACCAC TCAACACCAA TTCTTCACGG GGTGGGACAA AGAGAACGAA GGCACCGCAG CCTACTACGG GAAGAAATGG AAGGCTGCAG TCGACGCTAC CCGATCATCT GCAACGACAG GTCTCGCCTT GTTCAACGGC AGCACGCTAT CTGGGTCTTA CTATTACTCA GCTTCCGGTG GGCGCACCGC TAACTCAGAA GATGTCTGGG AATCGCAAGT GAGCTACCTC CGCTCCGTCA ATGACCCCTA CAGTCTGAAA GCACCAGGGA ACTCCAACGC CAGTTGGACT GACACAGTCA CGCAGAAAAC GTTGAAGAAC ATCTTCACAT CACTCGACGA CGTGAAGACC GTGACAGTAT CCGCAACCTA CAGTTCAGGG CAAGTGAAGT CACTGACCGC CATCTCAAGC ACCGGGCAAA AACAAACACT GACCGCAAAA GCAGACACCT GGCGTTCCCG TCTCGGTACG AAAGCCGCGT GGATCACCAA AATCACGGCA AACTAG
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Protein sequence | MWVLVKDGNL SGRNLVKTLQ VTTLHADEYS YRHDAYTRPP EGSVFHPANP DEYLQTGLMR FLTFLKILLV AALAASGASL TAAPALSSPG GGTASGLSMS NSVRFAAATS ASTVSPNTRT VFATAYHRNG QAMTGNVQLQ YRKTAGWKTL KTLPLDNGRA RLVRVPKSTS DYRWRYVPTG ATTRTFSVAV RPATSQSPST RFAAAVSSSS VFPGTKTTFA TAYHRSGKAM TGNVQLQYKS GSTWKTLKTL PLVDGRAKFV RVPKTTSTYR WRSTSTGATT KSFQVTVKPH ITLSTTASSV TKGGSVTLKG KYTRGGKVVT SGTVTLQYLS GSTWKNIRTV SVSQGTASTS VKPSSTTTYR MVASDANSSS VKVSVTGASV TYWVDSSVGL NARSGPGTSY SSLGMFANGT QLTHDPAKVQ TGGGYTWRQV TGKIGGKTVT AWVADSYLTT VKPTPPPPAT VPASFTLTGS GFGHGVGMSQ FGAYQMAREG KNATQILQHY YTGNTVKNFV SSKQYINVQL IGPGFNNQTA TTRTVSFKNG AAGTWRLVDK SGNILTGFSK RPTSQSVRLE VSGTNVKATL LDSSGKATTT TATASHIYVR WSGTSRFLST GPASVATVQG SISSSRSGNY RHGQLIVTTS SKTLNIVNNL KFQTEYLYGI AEMPSGWGYN GGQAALQAQA ITARTYAQNR LNSALNGTCN CHIVDTTQHQ FFTGWDKENE GTAAYYGKKW KAAVDATRSS ATTGLALFNG STLSGSYYYS ASGGRTANSE DVWESQVSYL RSVNDPYSLK APGNSNASWT DTVTQKTLKN IFTSLDDVKT VTVSATYSSG QVKSLTAISS TGQKQTLTAK ADTWRSRLGT KAAWITKITA N
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