| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1837 |
|---|
| Symbol | |
|---|
| ID | 8381001 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | - |
|---|
| Start bp | 2005759 |
|---|
| End bp | 2007243 |
|---|
| Gene Length | 1485 bp |
|---|
| Protein Length | 494 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 645004591 |
|---|
| Product | S-adenosyl-L-homocysteine hydrolase |
|---|
| Protein accession | YP_003161783 |
|---|
| Protein GI | 256833056 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0499] S-adenosylhomocysteine hydrolase |
|---|
| TIGRFAM ID | [TIGR00936] adenosylhomocysteinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.739236 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAACT TTGACGAAGC ACCAGGCCGT TACAAAGTCC GTGACCTCAA CCTCGCTGAA
GCGGGCCGTC ACCAAATCCG TCTTGCCGAG CACGAAATGC CAGGCCTTAT GGCACTGCGT
GAGGAGTACG GTGACAGTAA ACCTCTCGCC GGTGCGCGTA TCGCAGGTTC TTTGCACATG
ACCGTGCAAA CAGCTGTCCT CATCGAAACG CTCACCACAC TCGGGGCGCA GGTGCGCTGG
GCGTCCTGCA ACATTTTCTC CACTCAGGAC GAAGCTGCCG CAGCCATCGC GGTCGGCCCA
ACCGGAACCC CGGACAACCC AAGCGGGGTC CCCGTGTTTG CTTGGAAGGG TGAAACCCTC
AGCGAATATT GGGACTGCAC TGAACAGATC ATGACCTGGC GTGACGACCA CGGACACCTC
ACCGGTCCCA ACATGATCCT CGACGACGGT GGTGACGCAA CCCTGCTTGT CCACCTCGGC
GTCCAGTACG AAAAAGATGG CTCAGTACCC GAACCCCTGT TCCCGGGTGA TGCCGGCTAC
AACGCAGAGA AAGAAGAAAT CCACCGGGTG CTTCGCGCAT CGGTTGACAA ATCTGGCAAC
CACTGGACTG AGCTAGCCAA CAATATCCTT GGCGTCACCG AAGAAACCAC CACGGGTGTA
CACCGGCTCT ACGCGCTCGC AGAAAAAGAG GAACTCCTCT TTCCCGCGAT TAACGTCAAT
GACTCAGTGA CAAAGTCAAA GTTTGACAAC AAGTACGGTA TCCGCCACTC ACTACCTGAT
GGGATTAACC GTGCCACAGA CATCCTCATT GGGGGAAAGG TGGCGTTTGT TGCCGGATAT
GGTGACGTGG GGAAGGGAGC TGCTGAAGCG TTTCGTGGAC AAGGTGCGCG CGTGATCGTG
TCAGAGGTGG ATCCGATCTG TGCCCTCCAG GCAGCCATGG ACGGGTTCCA GGTCGCCCAG
CTTGAAGACG TTGTTGACCA AGCTGACTTC TTTATCACCA CGACCGGAAA CTTCAACGTG
ATTCGCCCAG AGCACGTGCT GGCCATGAAA GACAAAGCCG TCATTGGAAA TATTGGTCAC
TTTGACAATG AGATCGATAT TGCTGGTCTT GCCGCAATCG AAGGCGTCAC TCAGGTTGAG
ATCAAACCTC AAGTGCACGA ATGGACTCTC CCTAGTGGCC GCTCCGTGAT CGTGCTGTCA
GAAGGTCGTC TGCTGAACCT CGGAAATGCC ACAGGTCACC CCAGCTTTGT GATGTCGAAT
TCGTTCGCAA ACCAAGTCAT TGCGCAAATT GAGTTGTTCA CTAAAGCGCC ACACGGTGAA
TACCCCACAG GTGTGTACCG GCTCCCCAAA ATCCTCGACG AAAAGGTTGC TCGCCTTCAC
CTGGATGCGT TGGGTGCGAA ACTGACTCAA CTCTCACCAG AGCAAGCCGA GTACATTGGT
GTGCCAGTCA GTGGGCCGTA CAAACCGGAA CACTACCGCT ACTAG
|
|---|
| Protein sequence | MKNFDEAPGR YKVRDLNLAE AGRHQIRLAE HEMPGLMALR EEYGDSKPLA GARIAGSLHM
TVQTAVLIET LTTLGAQVRW ASCNIFSTQD EAAAAIAVGP TGTPDNPSGV PVFAWKGETL
SEYWDCTEQI MTWRDDHGHL TGPNMILDDG GDATLLVHLG VQYEKDGSVP EPLFPGDAGY
NAEKEEIHRV LRASVDKSGN HWTELANNIL GVTEETTTGV HRLYALAEKE ELLFPAINVN
DSVTKSKFDN KYGIRHSLPD GINRATDILI GGKVAFVAGY GDVGKGAAEA FRGQGARVIV
SEVDPICALQ AAMDGFQVAQ LEDVVDQADF FITTTGNFNV IRPEHVLAMK DKAVIGNIGH
FDNEIDIAGL AAIEGVTQVE IKPQVHEWTL PSGRSVIVLS EGRLLNLGNA TGHPSFVMSN
SFANQVIAQI ELFTKAPHGE YPTGVYRLPK ILDEKVARLH LDALGAKLTQ LSPEQAEYIG
VPVSGPYKPE HYRY
|
|---|
| |