Gene Jden_1831 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_1831 
Symbol 
ID8380995 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp2000176 
End bp2001363 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content60% 
IMG OID645004585 
Producthypothetical protein 
Protein accessionYP_003161777 
Protein GI256833050 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.156159 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGCA CATCGGTCAT CACCGCTCGC GAAACATCCA ATACCGCACT GAAACGACGT 
CTCAAATCCA CGTTCCTCCC GCTTGGTGCC ATCACTGTCC TCCTCGCCGC AATCTGGGCG
ATTATGGCGT TGGTGCCTAA CTTTTCTGGC GTGCCACTGG GCTACGACAA CCCCTACCCG
AAAGGAGCTC GAGCCCTCGC GCAAGTCCTC GGTGATGAAG GGGTGAACGT CACCGCAACA
GACAACCTCA CCGACACGCT CACCGCTACC AACAACAACA CGGACACTAC GATTTGGGTG
ACATCGTCAG AGTTCCTCAC CTCCGAAGAC GCCCGTGAAC TGACCGAGAC CGGGGCCCAT
CTGCTGTGGA CCAACCCCAC CCCAGACGTC CTCGACGCCC TGCCGATCAG CGTGTCGCAC
GCTGGGGGTT GGGCTACAGA CGACTCCACT CCCCCTGACT GTGACCTGCC TGCCGCGACG
TCCGCGGGAT CGATCACCTC CGGGGGAACT TCCTTCAGTT TCCCGGGAAC CGACGTCCCC
CGCGGAACGA ACGCCTGCTA CGACTCCGGA TTTGGTTACC ACCTGATTGA CGTCCTGGTC
GACAATGGAC CACGCATCAC ACTCCTTGAC GACGGCTACC TGTGGTCCAA TGAACGCATC
ACCGCCGACG GGCACGCCGC ACTGGGCTTA ACGCTCCTTG GCAGTAACCC GTCACTGGTG
TGGTTCACCC CTGCAAGCCC GGAACCTCCC ACATTGCTCG AAGACGGTGA ACTCGCCACA
CCAATCCAGT TCACATTGGT CGCCACACTG CTCGCAATCG CAGCTGTCTT CGTGATTCTC
GCTGCAATGC GACGGTTAGG GCCAGTTGTT TCTGAGCAGC TTCCTGTTGT TGTTCGCGCA
TCAGAAACCG TTCGAGGACG CGCCCGGCTT TACCGCCAAG CTCGAGCCTA TGATCGGGCA
AGTGAGCTTC TGTGCTCTGC AACCGCGCTT GCCTGCGCTC AGCGACTTGG CGTCTCCCCG
CACGCGGAAC GTGAAGCGCT GATCTCAGCG ATCGTGCGGG TCACACACTA CTCAGACACC
GACATTTCCG CTCTCTTGTT TGGACCTGCA CCACGCAGCG AACAAGAGCT TCTCCACCTT
GCTGACCGCT TGGCAACCCT AGAAAGTGAG ATCTCAGATG TCCGATAA
 
Protein sequence
MSSTSVITAR ETSNTALKRR LKSTFLPLGA ITVLLAAIWA IMALVPNFSG VPLGYDNPYP 
KGARALAQVL GDEGVNVTAT DNLTDTLTAT NNNTDTTIWV TSSEFLTSED ARELTETGAH
LLWTNPTPDV LDALPISVSH AGGWATDDST PPDCDLPAAT SAGSITSGGT SFSFPGTDVP
RGTNACYDSG FGYHLIDVLV DNGPRITLLD DGYLWSNERI TADGHAALGL TLLGSNPSLV
WFTPASPEPP TLLEDGELAT PIQFTLVATL LAIAAVFVIL AAMRRLGPVV SEQLPVVVRA
SETVRGRARL YRQARAYDRA SELLCSATAL ACAQRLGVSP HAEREALISA IVRVTHYSDT
DISALLFGPA PRSEQELLHL ADRLATLESE ISDVR