| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1823 |
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| Symbol | |
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| ID | 8380987 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 1992272 |
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| End bp | 1992931 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 645004577 |
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| Product | sigma 54 modulation protein/ribosomal protein S30EA |
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| Protein accession | YP_003161769 |
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| Protein GI | 256833042 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1544] Ribosome-associated protein Y (PSrp-1) |
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| TIGRFAM ID | [TIGR00741] ribosomal subunit interface protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAGATCG TAGTAGTGGG TCGCCACACT GAAGTAGCAG ACCGATTCCG CGAACACGCA
GAGGAAAAAC TCAGCAAAAT CGCGCAATAC GCGCCCACGG CACGGCGCGT CGACGTCGAA
GTCACCCACG AATACAACCC CCGCCAATCA GCACGATCCG AACGGGTAGA ACTGACTGTC
CGCGACAAAG GGCCAGTTAT CCGAGCGGAA GCTGCATCCG ACGACCGTTT CGGGGCGCTT
GATCTCGCCC TCGACAAACT CCAAGAACGC CTACGGCGAG CGCACGAACG CAAGTACACA
TCCAAACGCC GGATCCCTCG CAAACTTGAG GTCCCCAAAG ACCTCGACGC GATCGAGATG
ATCCCTGACC CCGAACCGCC CACACAAGAA GAGGCCACAC CGTCAGTTCC ACATCCCACC
CAACCAGGGG AAACAGTGGA AGTGCAGTTG GGTGATTCCC CAGTGATCAT CCGGCAAAAA
CTCCACAATG CATCCCCCAT GACAGTGGAT GACGCCATTG ACGAGATGGA ACTTGTTGGT
CACGACTTCT TCTTGTTCGT CGATAAAGAC TCCAAACGCC CATCTGTCGC CTACCGGCGC
CGCGGATGGA CCTATGGGGT GATCGCACTG AACACCGAAT GCGACTGCGA AGAAGAATGA
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| Protein sequence | MEIVVVGRHT EVADRFREHA EEKLSKIAQY APTARRVDVE VTHEYNPRQS ARSERVELTV
RDKGPVIRAE AASDDRFGAL DLALDKLQER LRRAHERKYT SKRRIPRKLE VPKDLDAIEM
IPDPEPPTQE EATPSVPHPT QPGETVEVQL GDSPVIIRQK LHNASPMTVD DAIDEMELVG
HDFFLFVDKD SKRPSVAYRR RGWTYGVIAL NTECDCEEE
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