| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1822 |
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| Symbol | |
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| ID | 8380986 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 1989283 |
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| End bp | 1992003 |
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| Gene Length | 2721 bp |
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| Protein Length | 906 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 645004576 |
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| Product | preprotein translocase, SecA subunit |
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| Protein accession | YP_003161768 |
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| Protein GI | 256833041 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
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| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTCACCA TCCTGGAGAA AATCCTTCGC TTCGGCGAAG GGAAAATCCT CAAGAAACTG
AACGTCATCG TTCAGCAGGT CAACGCCCTC GAAGAGCACT ACCAGGCGTT CACCGACGAA
GAACTCCGCG AGGAGACCGC GCGATTCAAA GAAGACATCG CTGAAGGTAG TTCACTGGAC
GCATTGCTCC CGCAGGCATT CGCGGTCGTG CGTGAAGCAT CTGTGCGAAC ATTGGGCCAG
CGTCACTACG ATGTGCAAAT CATGGGTGGT GCAGCCCTCC ACATGGGGAA CATCGCCGAA
ATGAAGACCG GTGAAGGAAA GACCCTGGTC GCCACCCTCC CTGCCTACCT CAACGCCCTG
TCAGGACAAG GCGTTCACAT TGTGACCGTG AACGACTACC TTGCGAAATA CCAGTCCGAC
ATCATGGGTC GTGTGTTCCG GTTCCTTGGG CTGAAAACTG GCTGCATCGT TTCTGGCCAA
AACCCCACTG AGCGGCGTGC CCAGTACGAA GCTGACATCA CCTACGGGAC AAACAACGAG
TTCGGGTTTG ACTACCTGCG TGACAACATG GCGTGGTCCA TGAAAGATCT TGTGCAACGT
GGCCATAACT TCGCCATCGT TGACGAGGTT GACTCCATTT TGATCGACGA AGCCCGAACC
CCGCTGATCA TCTCCGGTCC CGCCGATGGT GATGTCAACA AGTGGTACAC GGAGTTCGCA
AAAGTCTCAC GCCGCCTGAT CGCGGGGGAA GATTACGAAG TCGACGAAAA GAAACGCACC
ATCGGGATCC TGGAACCCGG TATTGAAAAG GTCGAAGACT ACCTGGGGAT CGACAACTTG
TATGAGTCCC TGAACACGCC ACTGATCGGG TTCCTGAACA ACTCGATCAA AGCTAAAGAG
CTCTTCAAAC GTGACAAAGA CTACGTGGTC ATGAACGGTG AAGTCATGAT CGTTGACGAA
CACACGGGCC GTATTCTGGC CGGTCGCCGT TACAACGAAG GCATGCACCA GGCGATCGAA
GCCAAAGAGG GCGTCACGAT CAAAGCCGAG AACCAGACCC TGGCAACAAT CACGTTGCAG
AACTACTTCC GCCTCTATTC CACGCTGTCA GGGATGACCG GTACCGCGGA AACGGAAGCA
GCCGAGTTCC ACTCCACCTA CTCACTAGGT GTTGTACCGA TTCCGACGCA CCGTCCGGTG
CAACGTGTTG ACCAGTCGGA CCTCATTTAC AAGACAGAAA CTGGCAAGTT CCAGGCGGTT
GTTCAAGACA TTGTTGAGCG GCACGCTCAC GGGCAACCCA TTTTGGTGGG AACGACGTCT
GTGGAGAAAT CAGAGCTGCT CTCCTCTCTG TTGAAAAAAC AAGGTGTCCC TCACGAGGTG
CTCAACGCGA AGCAGCACGC CCGAGAAGCG GCCATTGTTG CGATGGCTGG GCGCAAAGGT
GCGGTCACGG TAGCCACCAA TATGGCTGGT CGTGGAACTG ACATCATGCT CGGTGGAAAC
GCCGAATTCA TGGCCCATGC CGAACTAGAA CAACGCGGGC TTGACGCAGT AGAACACCCA
GACGAATACG AAGCAGCGTG GGATGAAGCA CTTGCTGCTG CTCAACAAGC TGTCAAAGAC
GAACACGACG AAGTCGTGGA ACTCGGGGGC TTGTACGTTC TGGGCACCGA ACGCCACGAA
TCACGGCGTA TTGACAACCA GTTGCGTGGA CGTTCCGGGC GCCAAGGTGA CCCCGGTGAG
TCACGGTTCT ACTTGTCCAT GGAAGACGAA CTGATGCGGT TGTTCGGTTC AGGTCTTGCT
GAATCCATGA TGAACCGTGC CGGGTTCCCA GAAGACGTGC CACTGGAATC GAAGATGGTG
TCGCGTGGTA TCGCCTCAGC TCAGGGGCAA GTGGAGTCAA GGAACCTGGA GATCCGCAAG
AACGTCCTCA AGTACGATGA CGTGCTCTCC CGCCAGCGCA CAGTCATTTA TGACGAACGT
CGCCGTGTCC TTGAGGGCGA GGACATGCAG GAACAAATCC AGCACTTCCT CACCGATGTC
ATCACTGGGC ATGTTGAGAT GACAACCACG TCCAATGACC AAAACGAATG GGACTTGGAA
GCGCTGTGGG CAACCCTGAA AGGGATCTAC CCAATCTCGA TCACCGTGGA GGAAGTGGAA
GAGCAAGCAG GTGGCCGCAC CCACCTGAAA CGCGATGAAC TGCTGGAAGA AATCCTCTCT
GACGCCCGCT TGGCATATGA GCAACGCGAA GCCGAACTCG GCTCGGAGAA TCTCCGAGAC
TTGGAACGCC GAATCGTGTT GTCCGTTGTA GACCGTAAGT GGCGCGAACA TCTCTACGAG
ATGGACTACC TCAAGGAAGG CATCGGGTTG CGTGCTATGG CGCAACGTGA CCCCCTTGTG
GAGTACCAGC GTGAAGGTTA TGACATGTTC ACCGCAATGC TGGAAGGCGT GAAAGAAGAG
GCCGTTGGCT TCTTGTACAA CCTCCAGGTC ACTGTGGAAA AGAAGGAAGT TGACCTCGAC
GGTGACGGCA CTCCCGACAT CGAAGAAGAC GTGATGGTGG CGAAAGGGCT TGATCAGCCC
AAGCGGCCCA CCCAGCTTCA GTACACGTCG TCGGAAGGGT CAACCTCCGA GTCGGGTTCG
GGAACCTCAG GCGGAGCAGC GAACGCTGGT TCGAACCGCG CAGAGCGCCG AGCAGCGCAA
AAGCGTTCGC GGAAACGGTG A
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| Protein sequence | MVTILEKILR FGEGKILKKL NVIVQQVNAL EEHYQAFTDE ELREETARFK EDIAEGSSLD
ALLPQAFAVV REASVRTLGQ RHYDVQIMGG AALHMGNIAE MKTGEGKTLV ATLPAYLNAL
SGQGVHIVTV NDYLAKYQSD IMGRVFRFLG LKTGCIVSGQ NPTERRAQYE ADITYGTNNE
FGFDYLRDNM AWSMKDLVQR GHNFAIVDEV DSILIDEART PLIISGPADG DVNKWYTEFA
KVSRRLIAGE DYEVDEKKRT IGILEPGIEK VEDYLGIDNL YESLNTPLIG FLNNSIKAKE
LFKRDKDYVV MNGEVMIVDE HTGRILAGRR YNEGMHQAIE AKEGVTIKAE NQTLATITLQ
NYFRLYSTLS GMTGTAETEA AEFHSTYSLG VVPIPTHRPV QRVDQSDLIY KTETGKFQAV
VQDIVERHAH GQPILVGTTS VEKSELLSSL LKKQGVPHEV LNAKQHAREA AIVAMAGRKG
AVTVATNMAG RGTDIMLGGN AEFMAHAELE QRGLDAVEHP DEYEAAWDEA LAAAQQAVKD
EHDEVVELGG LYVLGTERHE SRRIDNQLRG RSGRQGDPGE SRFYLSMEDE LMRLFGSGLA
ESMMNRAGFP EDVPLESKMV SRGIASAQGQ VESRNLEIRK NVLKYDDVLS RQRTVIYDER
RRVLEGEDMQ EQIQHFLTDV ITGHVEMTTT SNDQNEWDLE ALWATLKGIY PISITVEEVE
EQAGGRTHLK RDELLEEILS DARLAYEQRE AELGSENLRD LERRIVLSVV DRKWREHLYE
MDYLKEGIGL RAMAQRDPLV EYQREGYDMF TAMLEGVKEE AVGFLYNLQV TVEKKEVDLD
GDGTPDIEED VMVAKGLDQP KRPTQLQYTS SEGSTSESGS GTSGGAANAG SNRAERRAAQ
KRSRKR
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