Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_1806 |
Symbol | kgd |
ID | 8380970 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | + |
Start bp | 1973055 |
End bp | 1976831 |
Gene Length | 3777 bp |
Protein Length | 1258 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 645004560 |
Product | alpha-ketoglutarate decarboxylase |
Protein accession | YP_003161752 |
Protein GI | 256833025 |
COG category | [C] Energy production and conversion |
COG ID | [COG0567] 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes |
TIGRFAM ID | [TIGR00239] 2-oxoglutarate dehydrogenase, E1 component |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAAGTGG GCGAACCCAA CGTGTCCTCC AATGCTGAGT CAACGTCGAT CGGCACCTCA AACACCGACT TCGGAGCCAA CGAATGGCTT GTCGACGAAA TCCGCGAGCA ATACCTCGCG AACCCCGACT CCGTCGCACC AGAATGGCGT GAATACTTCG CCTCCGCGAC CCCCGCACCA GCAACAACCC CCACCACCCC AGCCCCCGCC CCACGCGAGT CGCAAGCAGA ACGCGAAACC CGCAAACAAC ACCAGGCAGC CACCGTGAGC ACACCAGAAC CCACAAGTGC CCCCAGCCCA GAACGGCCCG TCGCGACCGC GCAGCCTGCC ACCGCACCCT ACGCAGCCCA AGCAAAACGC GCATCGAAAG TCGTTAACGA CGACACACCC GACAACATCG AACGCCTCAA AGGCCCAGCC GCGCGACTCA TCAAAAACAT GGAGACCAGC CTCGAGGTCC CCACCGCCAC ATCCGTGCGC GCCATCCCCG CCAAGCTCAT GGTGGACAAC CGCATCGTCA TCAACAACCA CCTCGTACGC ACCCGCGGTG GCAAAGTATC CTTCACCCAC CTCATCGGAT TCGCGCTCGT TGAAGCCCTC GCTGACATGC CAGCCATGAA CGCCGGGTAC CTCGAGCAGG ACGGAAAACC CGCTGCGGTT TATCCCGCGC ACGTCAACAT CGGTCTTGCC ATTGACATCC AAAAGCCTGA CGGCACCCGC CAACTCCTGG TCCCGGCCAT CAAAAAGGCC GACACCATGG ACTTTGCTCA GTTTGTCAGC GCCTATGAAG ACGTTGTCCG CCGCGCTCGC CAGGGCAAAC TCGACATTAC TGACTTCCAA GGTGTCACCG TCTCCCTGAC GAACCCCGGC ACCATCGGAA CCGTCCACTC CGTCCCGCGC CTCATGAAAG GCCAAGGAGC CATCATCGGG GTCGGGGCCA TGGACTACCC GGCAGAATTT GCTGGTGCCT CCACAGAACA ACTCTCCCGC ATGGGTGTCT CCAAAGTCCT CACCCTCACC TCCACCTACG ACCACCGCAT CATCCAAGGT GCACAGTCCG GTGACTTCCT GCGCATCATC GCAACCAAAC TTCTGGGTGA AGACGGCTTC TACGACCGCG TGTTCCAGGC GCTACGCATC CCCTACGAAC CCGTTCGTTG GGTACGCGAC AACACCATCA ACGCAGACGC CGAAGCGGAA AAACCAGCGC GTATTGCCGA ACTCATCCAC TCCTACCGGT CCCGCGGCCA CCTCATGGCT GACACAGACC CCCTCGCCTA CCGACAACGG CGCCACACTG ACCTCGACAT TCAAACCCAC GGGTTGACCC TGTGGGACCT CGACCGAGTC TTCCCCGTCC ACGGGTTCTC CGGCCGGTCC AAAATGTCAT TGCGCGACAT CCTCGGGATC CTCCGGGACT CTTACTGCCG GACCGTCGGC ATCGAGTACA TGCACATCGC TGACCGCGAC CAACGCGCAT GGTTCCAAGA ACGCCTCGAA AACCCCTACG AGCGGACTCC CCGCGAGGAA CAACTGCGGA TTCTGCGCCG CCTCAACGCT GCAGAAGCCT TTGAAACGTT CCTGCAAACC AAGTTCGTGG GGCAAAAACG GTTCTCACTC GAAGGAGGCG AATCGATCAT CCCGATGCTG GACGCCATTT TGTCCAGCGC CGCTGAAGGT GGCCTCGATG AGGTGTCCAT CGGGATGGCA CACCGCGGAC GCCTCAACGT GCTCGCGAAC ATTGCCGGAA AGAGCTACGG ACAGATCTTC GCTGAATTTG AAGGCAACCT CGACCAGCGT ACCTACCAGG GATCTGGCGA TGTGAAGTAC CACCTCGGCA CGGAAGGGAC CTTCACCGCA GAATCTGGGG CAACCACAAA GGTATCCCTG GCAGCAAACC CCTCCCACCT CGAAGCGGTC AACCCCGTCC TGGAGGGGAT CGTCCGGGCA AAACAAGACC GTATCGATCT AGGCGGCGAC GGGTTCTCCG TCCTACCAAT CCTCGTTCAC GGTGACGCCG CGTTCGCAGG ACAAGGCGTG GTCATGGAGG TTTTGAACCT CTCCCAGCTA CGGGGATACC GCACCGGTGG CACCATCCAC CTCATCATCA ACAACCAAGT AGGATTCACC ACCGGACCAT CAAACTCACG GTCCACCCAC TACGCCACCG ACGTTGCCAA GGGCTACCAA GTACCCGTCT TCCACGTCAA CGGTGACGAC CCTGAAGCTG TTGTACGCAT CGCACGGCTT GCTTTCGACT ACCGGGAACG GTTCAACCAA GACGTCATCA TCGACATGGT GTGCTACCGC CGCCGTGGAC ACAACGAAGG TGATGACCCG TCAATGACCC AACCGCTGAT GTACAACCTC ATTGAAGCGA AGAACTCGGT GCGTAAGCTC TACACCGAAA CTCTCGCATC CCGTGGCGAC ATCAGCGACG AGGAAGCTGC CGAAGCTCTC CAGGACTACC AAAACCAACT CGAACGTGTC TTCACCGAAA CACGAGAAGG CGGTTTCGTC CCACCCGCCG ACACCGAACC TGTCGCAGGT TTGGAGCGCC CTGAGTCCCA GCGTGAAGAC GCCGGCACCA TGGTCGGATG GCAAACAGCT GTCCCACAGT CAGTCCTTGA CCGCATTGGT GATGCCCACA TCAACCCACC TGCCGGATTC ACCGTGCACA CAAAGCTGCG GCAACTGCTT GATAAGCGCC ACAAAATGGT GAGTGAAGGT GGCATTGACT GGGGTTACGC CGAGATTTTG GCGTTTGGTT CCCTCCTCAT GGAAGGAACT CCTGTTCGAC TCGCTGGGCA AGACTCTCGA CGCGGCACCT TCGTGCAACG GCACGCGGTT CTCCACGACC GCAACACCGG GGCAGAATGG ACTCCCCTGC TGTACTTGTC CGCCGACCAA GCAAAGTTCT GGGTCTATGA CTCATCACTG TCCGAATATG CGTGCCTCGG ATTTGAGTAC GGGTACTCCG TGGAGCGCCC CGACGCACTC GTGCTGTGGG AAGCCCAATT TGGCGACTTC GTCAACGGGG CTCAAACAGT GATCGACGAG TTCATTTCCT CCGCAGAGCA AAAGTGGTCA CAGAACTCCT CAGTGGTTCT CCTCCTCCCA CACGGGTATG AAGGACAAGG ACCCGACCAC TCCTCGGCAC GCATCGAGAG GTTCTTGCAA CTGTGCGCTG AGAACAACAT GACGATCGCC TATCCCTCAA CTCCAGCCCA GTACTTCCAC CTTCTGCGGC ACCAAGCGTA CGCACGCCCT CGCCGCCCGC TGGTCGTCAT GACACCAAAG TCCATGCTTC GACTCAAAGC AGCCGCATCA ACACCCGCAG ATTTCACCTC AGGCACATTC CGACATGTCA TTGGTGACGA CGCTGCCGCT GCACGCGCCG CCCAGGGGGG AACAATTGAC CGCGTCGTCG TGTCCACCGG GAAAATCTCC TGGGAGCTCC TCGCCCACGC GAAGAAGACC CACGACACCT CCACTGCTTT TGTTCGCCTA GAACAGCTTT ATCCGCTCGA TGGTGACCAA CTCCGTGAGG CGTTGGCACC CTTTGGGGAT GCTGAAGTGG TGTGGGTCCA AGAAGAACCC GAAAACCAGG GTGCCTGGCC ATTCCTTGCC CTGAACCTTC CCCAACTGAT AGAAGGACGC TCCCTGCGTG TTATCGCCCG CCCTGCATCC GCATCGCCAG CAGTCGGTAT CGCCAAGGTG CACAAAGCGG AACAAGATAG CCTGATTCAA CGAGCTTTTG ACCGCGACAA CACGTAG
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Protein sequence | MKVGEPNVSS NAESTSIGTS NTDFGANEWL VDEIREQYLA NPDSVAPEWR EYFASATPAP ATTPTTPAPA PRESQAERET RKQHQAATVS TPEPTSAPSP ERPVATAQPA TAPYAAQAKR ASKVVNDDTP DNIERLKGPA ARLIKNMETS LEVPTATSVR AIPAKLMVDN RIVINNHLVR TRGGKVSFTH LIGFALVEAL ADMPAMNAGY LEQDGKPAAV YPAHVNIGLA IDIQKPDGTR QLLVPAIKKA DTMDFAQFVS AYEDVVRRAR QGKLDITDFQ GVTVSLTNPG TIGTVHSVPR LMKGQGAIIG VGAMDYPAEF AGASTEQLSR MGVSKVLTLT STYDHRIIQG AQSGDFLRII ATKLLGEDGF YDRVFQALRI PYEPVRWVRD NTINADAEAE KPARIAELIH SYRSRGHLMA DTDPLAYRQR RHTDLDIQTH GLTLWDLDRV FPVHGFSGRS KMSLRDILGI LRDSYCRTVG IEYMHIADRD QRAWFQERLE NPYERTPREE QLRILRRLNA AEAFETFLQT KFVGQKRFSL EGGESIIPML DAILSSAAEG GLDEVSIGMA HRGRLNVLAN IAGKSYGQIF AEFEGNLDQR TYQGSGDVKY HLGTEGTFTA ESGATTKVSL AANPSHLEAV NPVLEGIVRA KQDRIDLGGD GFSVLPILVH GDAAFAGQGV VMEVLNLSQL RGYRTGGTIH LIINNQVGFT TGPSNSRSTH YATDVAKGYQ VPVFHVNGDD PEAVVRIARL AFDYRERFNQ DVIIDMVCYR RRGHNEGDDP SMTQPLMYNL IEAKNSVRKL YTETLASRGD ISDEEAAEAL QDYQNQLERV FTETREGGFV PPADTEPVAG LERPESQRED AGTMVGWQTA VPQSVLDRIG DAHINPPAGF TVHTKLRQLL DKRHKMVSEG GIDWGYAEIL AFGSLLMEGT PVRLAGQDSR RGTFVQRHAV LHDRNTGAEW TPLLYLSADQ AKFWVYDSSL SEYACLGFEY GYSVERPDAL VLWEAQFGDF VNGAQTVIDE FISSAEQKWS QNSSVVLLLP HGYEGQGPDH SSARIERFLQ LCAENNMTIA YPSTPAQYFH LLRHQAYARP RRPLVVMTPK SMLRLKAAAS TPADFTSGTF RHVIGDDAAA ARAAQGGTID RVVVSTGKIS WELLAHAKKT HDTSTAFVRL EQLYPLDGDQ LREALAPFGD AEVVWVQEEP ENQGAWPFLA LNLPQLIEGR SLRVIARPAS ASPAVGIAKV HKAEQDSLIQ RAFDRDNT
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